Non-Coding RNA Search

rcov20b_m10.y1

Sequence:


               
               CGAGTTTTTTTTTTTTTTTTTTTTTTAGAGTTCATAAAATCTCTTCCGAGCCAGCGGGCT
GCAGCTAGAGCTGCCAACAAGTCCAGAGGCATTGCCTTGGGTTCAAGTGCCCCCAAAGAT
TTTGTTTAGTCACAGCTTCCAGAGCCTCCCACCACACTGCCAGGAGCTGCCAGAGCTCCA
GGCACCCCCCCACACCCTCCCTCCCAAGCCCAGTGCTGACCCTGTATCCGGGACAAAGTG
CTGGGGACAAATGTAATGATGCTCAGATGCTGATATGGAGTCACATCTCAGTCTCCGCCA
ATAGACTGTCCCCAAGTCCTGACGTCATTAGCACCATCTGAGAGCTGGGATCTGTGGAAG
GGCAGAGGGGTGTTCAGTCCACCAGGCATCCCTCCACTGGGGACCACAAACAGGTTAGAA
GTGGCCTAGGTTTCCCACACCCATGCTCCAAAACTCTTCCAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAGTTTTTTTTTTTTTTTTTTTTTTAGAGTTCATAAAATCTCTTCCGAGCCAGCGGGCT
GCAGCTAGAGCTGCCAACAAGTCCAGAGGCATTGCCTTGGGTTCAAGTGCCCCCAAAGAT
TTTGTTTAGTCACAGCTTCCAGAGCCTCCCACCACACTGCCAGGAGCTGCCAGAGCTCCA
GGCACCCCCCCACACCCTCCCTCCCAAGCCCAGTGCTGACCCTGTATCCGGGACAAAGTG
CTGGGGACAAATGTAATGATGCTCAGATGCTGATATGGAGTCACATCTCAGTCTCCGCCA
ATAGACTGTCCCCAAGTCCTGACGTCATTAGCACCATCTGAGAGCTGGGATCTGTGGAAG
GGCAGAGGGGTGTTCAGTCCACCAGGCATCCCTCCACTGGGGACCACAAACAGGTTAGAA
GTGGCCTAGGTTTCCCACACCCATGCTCCAAAACTCTTCCAGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               23-415, gnl|bosTau2|chr23 (17318988-17319374)
               

               
               23-415, gnl|Hg17|chr6 (43582681-43583088)
               

               
               23-415, gnl|Mm7|chr17 (44386715-44386339)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-415, gnl|bosTau2|chr23 (17318988-17319374)
               

               
               23-415, gnl|Hg17|chr6 (43582681-43583088)
               

               
               23-415, gnl|Mm7|chr17 (44386715-44386339)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cov (0.132153)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.132153)

	23-415, gnl\|bosTau2\|chr23 (17318988-17319374)
	23-415, gnl\|Hg17\|chr6 (43582681-43583088)
	23-415, gnl\|Mm7\|chr17 (44386715-44386339)