Non-Coding RNA Search

rcov31b_g3.y1

Sequence:


               
               GGGGACATCGCCATTGATGACGTCACACTGAAGAAGGGAGAGTGTCCCAGGAAGCAGATG
GATCCCAATAAAGTGGTGGTGATGCCGGGCAGTGGAGCCCCCTGCCAGCCCCGCCCGCAA
CTCTGGGGGTCCATGGCCATCTTCCTCTTGGTGTGGCAAAGATGATGAGAGCTTCCTGGC
TCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGACATCGCCATTGATGACGTCACACTGAAGAAGGGAGAGTGTCCCAGGAAGCAGATG
GATCCCAATAAAGTGGTGGTGATGCCGGGCAGTGGAGCCCCCTGCCAGCCCCGCCCGCAA
CTCTGGGGGTCCATGGCCATCTTCCTCTTGGTGTGGCAAAGATGATGAGAGCTTCCTGGC
TCC

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               63-180, gnl|bosTau2|chr23 (12230294-12230411)
               

               
               63-180, gnl|canFam2|chr12 (9660026-9660343)
               

               
               63-180, gnl|echTel1|scaffold_319021 (78978-78670)
               

               
               63-180, gnl|hg17|chr6 (37712949-37713260)
               

               
               63-180, gnl|Hg17|chr6 (37713224-37713107)
               

               
               63-180, gnl|mm7|chr17 (28023614-28023922)
               

               
               63-180, gnl|Mm7|chr17 (28023886-28023771)
               

               
               63-180, gnl|monDom2|scaffold_42 (8343180-8342884)
               

               
               63-180, gnl|panTro1|chr5 (38203306-38203617)
               

               
               63-180, gnl|rheMac2|chr4 (37418211-37418519)
               

               
               63-180, gnl|rn3|chr20 (8150005-8150313)
               

               
               63-180, gnl|xenTro1|scaffold_541 (832391-832783)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               63-180, gnl|bosTau2|chr23 (12230294-12230411)
               

               
               63-180, gnl|canFam2|chr12 (9660026-9660343)
               

               
               63-180, gnl|echTel1|scaffold_319021 (78978-78670)
               

               
               63-180, gnl|hg17|chr6 (37712949-37713260)
               

               
               63-180, gnl|Hg17|chr6 (37713224-37713107)
               

               
               63-180, gnl|mm7|chr17 (28023614-28023922)
               

               
               63-180, gnl|Mm7|chr17 (28023886-28023771)
               

               
               63-180, gnl|monDom2|scaffold_42 (8343180-8342884)
               

               
               63-180, gnl|panTro1|chr5 (38203306-38203617)
               

               
               63-180, gnl|rheMac2|chr4 (37418211-37418519)
               

               
               63-180, gnl|rn3|chr20 (8150005-8150313)
               

               
               63-180, gnl|xenTro1|scaffold_541 (832391-832783)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cov (0.132153)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.132153)

	63-180, gnl\|bosTau2\|chr23 (12230294-12230411)
	63-180, gnl\|canFam2\|chr12 (9660026-9660343)
	63-180, gnl\|echTel1\|scaffold_319021 (78978-78670)
	63-180, gnl\|hg17\|chr6 (37712949-37713260)
	63-180, gnl\|Hg17\|chr6 (37713224-37713107)
	63-180, gnl\|mm7\|chr17 (28023614-28023922)
	63-180, gnl\|Mm7\|chr17 (28023886-28023771)
	63-180, gnl\|monDom2\|scaffold_42 (8343180-8342884)
	63-180, gnl\|panTro1\|chr5 (38203306-38203617)
	63-180, gnl\|rheMac2\|chr4 (37418211-37418519)
	63-180, gnl\|rn3\|chr20 (8150005-8150313)
	63-180, gnl\|xenTro1\|scaffold_541 (832391-832783)