Non-Coding RNA Search

rcsk13_l16.y1

Sequence:


               
               ATATGGACATTTCTGCCTCTGGTTACTTCCTTCTCCCAGCATTTCTCCTGCCCAGCTGAC
TCTAGCTTTGCTCCAGCAGTCAGTGATGAGCAATCATGGGTTTAGGAGTCCTCCTCAGAA
CGTAAATGCCAACTCATTAAATGTATTTAGATTGTCTGAAATCTTGCGAAAACTTTCTTA
ATTAGCTATTGGAGAATTTAACTGTGAATAAGGATGGTAGAGTCATTAATTAGAAGCTCT
GTGTGGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATATGGACATTTCTGCCTCTGGTTACTTCCTTCTCCCAGCATTTCTCCTGCCCAGCTGAC
TCTAGCTTTGCTCCAGCAGTCAGTGATGAGCAATCATGGGTTTAGGAGTCCTCCTCAGAA
CGTAAATGCCAACTCATTAAATGTATTTAGATTGTCTGAAATCTTGCGAAAACTTTCTTA
ATTAGCTATTGGAGAATTTAACTGTGAATAAGGATGGTAGAGTCATTAATTAGAAGCTCT
GTGTGGAT

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               9-248, gnl|bosTau2|chr4 (54326976-54327214)
               

               
               9-248, gnl|canFam2|chr16 (13661846-13661668)
               

               
               9-248, gnl|dasNov1|scaffold_51348 (6160-5950)
               

               
               9-248, gnl|hg17|chr7 (137115727-137115910)
               

               
               9-248, gnl|Hg17|chr7 (137116034-137115764)
               

               
               9-248, gnl|loxAfr1|scaffold_134385 (1257-1086)
               

               
               9-248, gnl|mm7|chr6 (37348098-37348255)
               

               
               9-248, gnl|panTro1|chr6 (139857326-139857509)
               

               
               9-248, gnl|rheMac2|chr3 (175470093-175470276)
               

               
               9-248, gnl|rn3|chr4 (65065432-65065588)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-248, gnl|bosTau2|chr4 (54326976-54327214)
               

               
               9-248, gnl|canFam2|chr16 (13661846-13661668)
               

               
               9-248, gnl|dasNov1|scaffold_51348 (6160-5950)
               

               
               9-248, gnl|hg17|chr7 (137115727-137115910)
               

               
               9-248, gnl|Hg17|chr7 (137116034-137115764)
               

               
               9-248, gnl|loxAfr1|scaffold_134385 (1257-1086)
               

               
               9-248, gnl|mm7|chr6 (37348098-37348255)
               

               
               9-248, gnl|panTro1|chr6 (139857326-139857509)
               

               
               9-248, gnl|rheMac2|chr3 (175470093-175470276)
               

               
               9-248, gnl|rn3|chr4 (65065432-65065588)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               csk (0.140746)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csk (0.140746)

	9-248, gnl\|bosTau2\|chr4 (54326976-54327214)
	9-248, gnl\|canFam2\|chr16 (13661846-13661668)
	9-248, gnl\|dasNov1\|scaffold_51348 (6160-5950)
	9-248, gnl\|hg17\|chr7 (137115727-137115910)
	9-248, gnl\|Hg17\|chr7 (137116034-137115764)
	9-248, gnl\|loxAfr1\|scaffold_134385 (1257-1086)
	9-248, gnl\|mm7\|chr6 (37348098-37348255)
	9-248, gnl\|panTro1\|chr6 (139857326-139857509)
	9-248, gnl\|rheMac2\|chr3 (175470093-175470276)
	9-248, gnl\|rn3\|chr4 (65065432-65065588)