Non-Coding RNA Search

rcsk17_f19.y1

Sequence:


               
               tgccaactaaaatcacaattaggtaccatttcacacccaccagaatggttaaaactaaaa
agactgacaattccaagagttgacaaggctgtAGGTTAAGTCTTAATCATTGCTGGTGAG
GGTGTAAATTGATTTAACCACTTTGTAAAACTAGCAGTATCTACTAAAGATAAATATATA
CCTATCCTGTGACCTAATAATTCCATATATATATCTATGAAATAAGTGTATATACTCTCT
AAAGACATGTATGTTCACAGCAACTTTGTTTATATAGTAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               tgccaactaaaatcacaattaggtaccatttcacacccaccagaatggttaaaactaaaa
agactgacaattccaagagttgacaaggctgtAGGTTAAGTCTTAATCATTGCTGGTGAG
GGTGTAAATTGATTTAACCACTTTGTAAAACTAGCAGTATCTACTAAAGATAAATATATA
CCTATCCTGTGACCTAATAATTCCATATATATATCTATGAAATAAGTGTATATACTCTCT
AAAGACATGTATGTTCACAGCAACTTTGTTTATATAGTAAAC

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               10-282, gnl|bosTau2|chr10 (16036937-16037215)
               

               
               10-282, gnl|canFam2|chr15 (21521326-21521604)
               

               
               10-282, gnl|hg17|chr14 (21019478-21019771)
               

               
               10-282, gnl|oryCun1|scaffold_200927 (14863-15136)
               

               
               10-282, gnl|panTro1|chr15 (19936465-19936758)
               

               
               10-282, gnl|rheMac2|chr7 (84207666-84207961)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-282, gnl|bosTau2|chr10 (16036937-16037215)
               

               
               10-282, gnl|canFam2|chr15 (21521326-21521604)
               

               
               10-282, gnl|hg17|chr14 (21019478-21019771)
               

               
               10-282, gnl|oryCun1|scaffold_200927 (14863-15136)
               

               
               10-282, gnl|panTro1|chr15 (19936465-19936758)
               

               
               10-282, gnl|rheMac2|chr7 (84207666-84207961)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               csk (0.140746)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csk (0.140746)

	10-282, gnl\|bosTau2\|chr10 (16036937-16037215)
	10-282, gnl\|canFam2\|chr15 (21521326-21521604)
	10-282, gnl\|hg17\|chr14 (21019478-21019771)
	10-282, gnl\|oryCun1\|scaffold_200927 (14863-15136)
	10-282, gnl\|panTro1\|chr15 (19936465-19936758)
	10-282, gnl\|rheMac2\|chr7 (84207666-84207961)