Non-Coding RNA Search

rcsk19_p24.y1

Sequence:


               
               TCTGGGGCAGTGGGCATGTCCCAGGCCTCAGCTTCCTCCTCTGGAAAATGATACCTCGGC
ATAAAGGTCACGAGGACAAGGTAAGTTAGCGCGTAAGGCCTCGGAGCAGTGCCGTAGTCA
GCAGTCGGCAAGGTTAGGGACGAGAAGGGAACGGTCACGGTGATGCGGTTCGGGTTTATG
GGGACAACAGACACGTCAAAGCTCAAGGCTGGCTTCCTTCACGATTTAAGCACGTGTTTG
TTCTAGAAGTGGTATCGGTCATCTGTAGCGAAAGAATGATACGGTTAGTGCAAGCTTGTT
GGCCTGGCTGTGCAACGAATCACACTTTTTATATATCTGGAATGTTTAGCTATGTTTTGT
TTTTTCATTTTCCAAGTTCTGTTTGATTTACTCACCCATTCAATTCTCAACCCAATGAAG
ATGAGAAGGCAGGGTATTTCCCTAATTTACACGCAAGGAAATAAAGAACATAGGTTAATT
GCTTGCCTAAAATCACACAGCTAATTAGTAAATGGGCAAGAACAAACAATTTTAATTTGG
AGCTAGAAAATTAGAAACATTATTAGCGTTGTTATTATTATTCCTTAATTATGCATTTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTGGGGCAGTGGGCATGTCCCAGGCCTCAGCTTCCTCCTCTGGAAAATGATACCTCGGC
ATAAAGGTCACGAGGACAAGGTAAGTTAGCGCGTAAGGCCTCGGAGCAGTGCCGTAGTCA
GCAGTCGGCAAGGTTAGGGACGAGAAGGGAACGGTCACGGTGATGCGGTTCGGGTTTATG
GGGACAACAGACACGTCAAAGCTCAAGGCTGGCTTCCTTCACGATTTAAGCACGTGTTTG
TTCTAGAAGTGGTATCGGTCATCTGTAGCGAAAGAATGATACGGTTAGTGCAAGCTTGTT
GGCCTGGCTGTGCAACGAATCACACTTTTTATATATCTGGAATGTTTAGCTATGTTTTGT
TTTTTCATTTTCCAAGTTCTGTTTGATTTACTCACCCATTCAATTCTCAACCCAATGAAG
ATGAGAAGGCAGGGTATTTCCCTAATTTACACGCAAGGAAATAAAGAACATAGGTTAATT
GCTTGCCTAAAATCACACAGCTAATTAGTAAATGGGCAAGAACAAACAATTTTAATTTGG
AGCTAGAAAATTAGAAACATTATTAGCGTTGTTATTATTATTCCTTAATTATGCATTTAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               77-600, gnl|bosTau2|chr3 (22015089-22015612)
               

               
               77-600, gnl|Hg17|chr1 (117197184-117197693)
               

               
               77-600, gnl|Mm7|chr3 (100874600-100874094)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               77-600, gnl|bosTau2|chr3 (22015089-22015612)
               

               
               77-600, gnl|Hg17|chr1 (117197184-117197693)
               

               
               77-600, gnl|Mm7|chr3 (100874600-100874094)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               csk (0.140746)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csk (0.140746)

	77-600, gnl\|bosTau2\|chr3 (22015089-22015612)
	77-600, gnl\|Hg17\|chr1 (117197184-117197693)
	77-600, gnl\|Mm7\|chr3 (100874600-100874094)