Non-Coding RNA Search

rcsp25b_l10.y1

Sequence:


               
               CCGCAGCCCCGCGCCGGCCGCCAGAGCCGCTTGTGCCGCGGGCCGCGGGGGACGAGGACG
CGGGGCGAGGAGCCGGCGGGCACAGCCTCAGCATGGACGTGACGGTCTCCGAGCTCATGG
AGCTCTTCCTGCAGAGCCCGCTGGTGACCTGGGTGAAAACTTTGGGCCCATTCGGAAGCG
GCAACCAGGACAACCTGACAATGTACGTGGATTTAGCGGACGGCATCTTTTGGAATCAGA
TCATGTTGCAAATAGACCCCAGGCCGACCAATCAACGCATCAACAAGCACGTCAACAACG
ACGTGAACCTTCGCATTCAGAACTTGACCATCCTGGTGCGCAACATCAAGACCTACTACC
AGCCCTGTCCTTCCGGCGAGAGTTGGCCTGTGAGTGGGAAGCCCCAGTGGGAGAAGCAGC
AG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGCAGCCCCGCGCCGGCCGCCAGAGCCGCTTGTGCCGCGGGCCGCGGGGGACGAGGACG
CGGGGCGAGGAGCCGGCGGGCACAGCCTCAGCATGGACGTGACGGTCTCCGAGCTCATGG
AGCTCTTCCTGCAGAGCCCGCTGGTGACCTGGGTGAAAACTTTGGGCCCATTCGGAAGCG
GCAACCAGGACAACCTGACAATGTACGTGGATTTAGCGGACGGCATCTTTTGGAATCAGA
TCATGTTGCAAATAGACCCCAGGCCGACCAATCAACGCATCAACAAGCACGTCAACAACG
ACGTGAACCTTCGCATTCAGAACTTGACCATCCTGGTGCGCAACATCAAGACCTACTACC
AGCCCTGTCCTTCCGGCGAGAGTTGGCCTGTGAGTGGGAAGCCCCAGTGGGAGAAGCAGC
AG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|12832457|dbj|BAB22115.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|12832457|dbj|BAB22115.1|

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               17-156, gnl|bosTau2|chr21 (35385670-35385532)
               

               
               17-156, gnl|Hg17|chr14 (90953869-90953724)
               


               
               254-362, gnl|bosTau2|chr21 (35375947-35375839)
               

               
               254-362, gnl|Hg17|chr14 (90944864-90944756)
               

               
               254-362, gnl|Mm7|chr12 (98517754-98517646)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-156, gnl|bosTau2|chr21 (35385670-35385532)
               

               
               17-156, gnl|Hg17|chr14 (90953869-90953724)
               


               
               254-362, gnl|bosTau2|chr21 (35375947-35375839)
               

               
               254-362, gnl|Hg17|chr14 (90944864-90944756)
               

               
               254-362, gnl|Mm7|chr12 (98517754-98517646)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               csp (0.161186)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csp (0.161186)

	17-156, gnl\|bosTau2\|chr21 (35385670-35385532)
	17-156, gnl\|Hg17\|chr14 (90953869-90953724)

	254-362, gnl\|bosTau2\|chr21 (35375947-35375839)
	254-362, gnl\|Hg17\|chr14 (90944864-90944756)
	254-362, gnl\|Mm7\|chr12 (98517754-98517646)