Non-Coding RNA Search

rcsp28b_b7.y1

Sequence:


               
               ATGCAGTTGCTGAAAGGGAAGAATATACTCTGTGACCTTACGAAGACAAAGGGAAGTGGA
AACACGGTGTCCATTACCAACGTGAATTTATGCCAGTTTCAGTTATCCAATAACAGTGTC
TCTTTTTTTCTGTATAACTGGGACAGTTCTTATGCCAGCTATTACATCTGTGAATTATCA
ATTTTGGATCCTCCACCTTTTCAAGTAGATATTCTAAGCAAAGAATATTTGAATATTTAT
GAATCACAGCTTGGTTGCCAACTGAAGTTCTGGTTACTTCTAGGATGTGCAGCCTTTGTT
GTAGTCTACATTATGGGATGTGTTCTTACATGTGGGCTTACAAAAAAGAAATATCGCCCC
AGCGTGCATGACCCTAATAGTGAATACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGCAGTTGCTGAAAGGGAAGAATATACTCTGTGACCTTACGAAGACAAAGGGAAGTGGA
AACACGGTGTCCATTACCAACGTGAATTTATGCCAGTTTCAGTTATCCAATAACAGTGTC
TCTTTTTTTCTGTATAACTGGGACAGTTCTTATGCCAGCTATTACATCTGTGAATTATCA
ATTTTGGATCCTCCACCTTTTCAAGTAGATATTCTAAGCAAAGAATATTTGAATATTTAT
GAATCACAGCTTGGTTGCCAACTGAAGTTCTGGTTACTTCTAGGATGTGCAGCCTTTGTT
GTAGTCTACATTATGGGATGTGTTCTTACATGTGGGCTTACAAAAAAGAAATATCGCCCC
AGCGTGCATGACCCTAATAGTGAATACA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61832813|ref|XP_583570.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61832813|ref|XP_583570.1|

Aligned organism(s): 12 entry(ies)

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Aligned organism(s): 12 entry(ies)

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               1-241, gnl|bosTau2|chr2 (53918723-53918483)
               

               
               1-241, gnl|canFam2|chr37 (15728260-15728858)
               

               
               1-241, gnl|echTel1|scaffold_318496 (5780-5171)
               

               
               1-241, gnl|hg17|chr2 (204645677-204646295)
               

               
               1-241, gnl|Hg17|chr2 (204645963-204646200)
               

               
               1-241, gnl|loxAfr1|scaffold_93483 (3035-2429)
               

               
               1-241, gnl|mm7|chr1 (61244464-61245092)
               

               
               1-241, gnl|Mm7|chr1 (61244733-61244973)
               

               
               1-241, gnl|monDom2|scaffold_39 (20023390-20022705)
               

               
               1-241, gnl|oryCun1|scaffold_210367 (120254-120868)
               

               
               1-241, gnl|panTro1|chr13 (94646303-94646921)
               

               
               1-241, gnl|rheMac2|chr12 (67826080-67826699)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-241, gnl|bosTau2|chr2 (53918723-53918483)
               

               
               1-241, gnl|canFam2|chr37 (15728260-15728858)
               

               
               1-241, gnl|echTel1|scaffold_318496 (5780-5171)
               

               
               1-241, gnl|hg17|chr2 (204645677-204646295)
               

               
               1-241, gnl|Hg17|chr2 (204645963-204646200)
               

               
               1-241, gnl|loxAfr1|scaffold_93483 (3035-2429)
               

               
               1-241, gnl|mm7|chr1 (61244464-61245092)
               

               
               1-241, gnl|Mm7|chr1 (61244733-61244973)
               

               
               1-241, gnl|monDom2|scaffold_39 (20023390-20022705)
               

               
               1-241, gnl|oryCun1|scaffold_210367 (120254-120868)
               

               
               1-241, gnl|panTro1|chr13 (94646303-94646921)
               

               
               1-241, gnl|rheMac2|chr12 (67826080-67826699)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               csp (0.161186)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csp (0.161186)

	1-241, gnl\|bosTau2\|chr2 (53918723-53918483)
	1-241, gnl\|canFam2\|chr37 (15728260-15728858)
	1-241, gnl\|echTel1\|scaffold_318496 (5780-5171)
	1-241, gnl\|hg17\|chr2 (204645677-204646295)
	1-241, gnl\|Hg17\|chr2 (204645963-204646200)
	1-241, gnl\|loxAfr1\|scaffold_93483 (3035-2429)
	1-241, gnl\|mm7\|chr1 (61244464-61245092)
	1-241, gnl\|Mm7\|chr1 (61244733-61244973)
	1-241, gnl\|monDom2\|scaffold_39 (20023390-20022705)
	1-241, gnl\|oryCun1\|scaffold_210367 (120254-120868)
	1-241, gnl\|panTro1\|chr13 (94646303-94646921)
	1-241, gnl\|rheMac2\|chr12 (67826080-67826699)