Non-Coding RNA Search

rcsp34b_j23.y1

Sequence:


               
               CGAGTGCAGCCTTGGCCTCAGCCGCGAGGCCCTCATTGCCCTGCTGGTGGTGCTGGCGGG
TGTCAGCGCCAGCTGCTTCTGCGCCCTCGTCATTGTGGCGATGGGCGTCATTCGAGCCAA
GGGTGAAACATGCCCTGGACACAGGGACAGCAGGTTGGTGGGGCACTTTGGGGTTCAGGA
GGATCGCATGGACCTGCACACGGTGCACGTGGAGTCCCACCTCATGGACCCCGACCTGGA
CGCCTCCATGATGCCTCCCCTGGAAGATCAAGGCCTCACAGCTATCACCATGGACTCCGG
GAACCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAGTGCAGCCTTGGCCTCAGCCGCGAGGCCCTCATTGCCCTGCTGGTGGTGCTGGCGGG
TGTCAGCGCCAGCTGCTTCTGCGCCCTCGTCATTGTGGCGATGGGCGTCATTCGAGCCAA
GGGTGAAACATGCCCTGGACACAGGGACAGCAGGTTGGTGGGGCACTTTGGGGTTCAGGA
GGATCGCATGGACCTGCACACGGTGCACGTGGAGTCCCACCTCATGGACCCCGACCTGGA
CGCCTCCATGATGCCTCCCCTGGAAGATCAAGGCCTCACAGCTATCACCATGGACTCCGG
GAACCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|25021058|ref|XP_203838.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|25021058|ref|XP_203838.1|

Aligned organism(s): 12 entry(ies)

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Aligned organism(s): 12 entry(ies)

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               150-295, gnl|bosTau2|chr11 (85503157-85503302)
               

               
               150-295, gnl|canFam2|chr9 (51820848-51820590)
               

               
               150-295, gnl|echTel1|scaffold_270494 (7595-7352)
               

               
               150-295, gnl|hg17|chr9 (137341191-137341458)
               

               
               150-295, gnl|Hg17|chr9 (137341457-137341312)
               

               
               150-295, gnl|mm7|chr2 (25296526-25296264)
               

               
               150-295, gnl|Mm7|chr2 (25296263-25296403)
               

               
               150-295, gnl|monDom2|scaffold_191 (1313727-1313935)
               

               
               150-295, gnl|panTro1|chrUn_random (14429146-14428879)
               

               
               150-295, gnl|rheMac2|chr15 (1074066-1073801)
               

               
               150-295, gnl|rn3|chr3 (3451767-3451505)
               

               
               150-295, gnl|xenTro1|scaffold_5404 (9126-9346)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               150-295, gnl|bosTau2|chr11 (85503157-85503302)
               

               
               150-295, gnl|canFam2|chr9 (51820848-51820590)
               

               
               150-295, gnl|echTel1|scaffold_270494 (7595-7352)
               

               
               150-295, gnl|hg17|chr9 (137341191-137341458)
               

               
               150-295, gnl|Hg17|chr9 (137341457-137341312)
               

               
               150-295, gnl|mm7|chr2 (25296526-25296264)
               

               
               150-295, gnl|Mm7|chr2 (25296263-25296403)
               

               
               150-295, gnl|monDom2|scaffold_191 (1313727-1313935)
               

               
               150-295, gnl|panTro1|chrUn_random (14429146-14428879)
               

               
               150-295, gnl|rheMac2|chr15 (1074066-1073801)
               

               
               150-295, gnl|rn3|chr3 (3451767-3451505)
               

               
               150-295, gnl|xenTro1|scaffold_5404 (9126-9346)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               csp (0.161186)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csp (0.161186)

	150-295, gnl\|bosTau2\|chr11 (85503157-85503302)
	150-295, gnl\|canFam2\|chr9 (51820848-51820590)
	150-295, gnl\|echTel1\|scaffold_270494 (7595-7352)
	150-295, gnl\|hg17\|chr9 (137341191-137341458)
	150-295, gnl\|Hg17\|chr9 (137341457-137341312)
	150-295, gnl\|mm7\|chr2 (25296526-25296264)
	150-295, gnl\|Mm7\|chr2 (25296263-25296403)
	150-295, gnl\|monDom2\|scaffold_191 (1313727-1313935)
	150-295, gnl\|panTro1\|chrUn_random (14429146-14428879)
	150-295, gnl\|rheMac2\|chr15 (1074066-1073801)
	150-295, gnl\|rn3\|chr3 (3451767-3451505)
	150-295, gnl\|xenTro1\|scaffold_5404 (9126-9346)