Non-Coding RNA Search

rcst05_l11.y1

Sequence:


               
               AGGAAAATCCCTAGGAAGTGACATCAATCAATGGAAAAGTAAGACTTTAACAAGGACAGC
AAAAGGATCTTAGAGGTACCAGCATTTTCCTTTGAAAAAGCTAGAGGTTGAAGGCAGGGC
CGTGCTACAGATAAGTGAGGCGATACAATGCTTAAACAGAGGAAATACTGTAGAAGAGCA
CTGGGTCCGAATTCTGGGTGCTGATAGTGGGCAAGCCTACCAGTGAGCACTGCGGGTCGG
AGCTGAGTCACACCACGGGGTCAGGAAGATTGAATAGGGGAGTGATGGAGCCCTGGGCTG
CCCTAATTGCGAGCACTAGACGTCATTCAGAATGCATTTCAGAGGAATAGAGGGTAATGA
TTTTTAAAGGGGCATGTGTGTATTTGGACCAGGCTTAGCCATGCCAAATTTATTGAGCTG
TCAGATTCCAGAAAGCTGTCCGTGTGTGCCCTCCTACATTAGGGTGTGCTGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGAAAATCCCTAGGAAGTGACATCAATCAATGGAAAAGTAAGACTTTAACAAGGACAGC
AAAAGGATCTTAGAGGTACCAGCATTTTCCTTTGAAAAAGCTAGAGGTTGAAGGCAGGGC
CGTGCTACAGATAAGTGAGGCGATACAATGCTTAAACAGAGGAAATACTGTAGAAGAGCA
CTGGGTCCGAATTCTGGGTGCTGATAGTGGGCAAGCCTACCAGTGAGCACTGCGGGTCGG
AGCTGAGTCACACCACGGGGTCAGGAAGATTGAATAGGGGAGTGATGGAGCCCTGGGCTG
CCCTAATTGCGAGCACTAGACGTCATTCAGAATGCATTTCAGAGGAATAGAGGGTAATGA
TTTTTAAAGGGGCATGTGTGTATTTGGACCAGGCTTAGCCATGCCAAATTTATTGAGCTG
TCAGATTCCAGAAAGCTGTCCGTGTGTGCCCTCCTACATTAGGGTGTGCTGTGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               18-474, gnl|bosTau2|chr5 (44167605-44167163)
               

               
               18-474, gnl|Hg17|chr22 (34471527-34471049)
               

               
               18-474, gnl|Mm7|chr15 (77173289-77172890)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-474, gnl|bosTau2|chr5 (44167605-44167163)
               

               
               18-474, gnl|Hg17|chr22 (34471527-34471049)
               

               
               18-474, gnl|Mm7|chr15 (77173289-77172890)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cst (0.140036)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.140036)

	18-474, gnl\|bosTau2\|chr5 (44167605-44167163)
	18-474, gnl\|Hg17\|chr22 (34471527-34471049)
	18-474, gnl\|Mm7\|chr15 (77173289-77172890)