Non-Coding RNA Search

rcst17_j12.y1

Sequence:


               
               ATTTTTTAGTTGGTATCATGGTGCCATCACCCGTGCTGAGGCTGAGAGTCGACTACAAGC
CCTGCAAAGAAGCTGGGTACTTGGTTCGGAACAGCGAGTCAGGGACCAGTAGGTACTCCA
TTGCACTAAAGTAAGTACTAGAGCCTCCTGGGCTCCCCCTGACTGGTTGTGGGAGTGGAG
TGCAGGCTTTCCTATCATAGGGAGAAGACCAGGCAAAAAAGATACACTTTGAAGGTGATT
CACCAGGGCCTTTTTTTTTTTTTTTTTTTgtctttttagggccacacccaggcatatgga
gggtcccaggctaagggtcgaatcagagctgtagctgccagccacagccacagctacatc
agatccgagccacatctgtgacctgcaccacagctcacggcaacaccggatcct

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTTTAGTTGGTATCATGGTGCCATCACCCGTGCTGAGGCTGAGAGTCGACTACAAGC
CCTGCAAAGAAGCTGGGTACTTGGTTCGGAACAGCGAGTCAGGGACCAGTAGGTACTCCA
TTGCACTAAAGTAAGTACTAGAGCCTCCTGGGCTCCCCCTGACTGGTTGTGGGAGTGGAG
TGCAGGCTTTCCTATCATAGGGAGAAGACCAGGCAAAAAAGATACACTTTGAAGGTGATT
CACCAGGGCCTTTTTTTTTTTTTTTTTTTgtctttttagggccacacccaggcatatgga
gggtcccaggctaagggtcgaatcagagctgtagctgccagccacagccacagctacatc
agatccgagccacatctgtgacctgcaccacagctcacggcaacaccggatcct

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-219, gnl|bosTau2|chr3 (8539287-8539071)
               

               
               1-219, gnl|Hg17|chr1 (151271620-151271421)
               

               
               1-219, gnl|Mm7|chr3 (89978858-89979061)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-219, gnl|bosTau2|chr3 (8539287-8539071)
               

               
               1-219, gnl|Hg17|chr1 (151271620-151271421)
               

               
               1-219, gnl|Mm7|chr3 (89978858-89979061)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cst (0.140036)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.140036)

	1-219, gnl\|bosTau2\|chr3 (8539287-8539071)
	1-219, gnl\|Hg17\|chr1 (151271620-151271421)
	1-219, gnl\|Mm7\|chr3 (89978858-89979061)