Non-Coding RNA Search

rcst21_l16.y1

Sequence:


               
               AGCATCGGGACCCCACCACAGAACTTCCTGGTCCTTTTTGACACCGGCTCCTCCAATCTG
GGGGTGCCCTCTGTCTACTGCAAGAGCCTGGCCTGCACCACCCATGCCCGCTTCAACCCC
AGCAAGTCCTCTACCTACTCCACCGACAGGCAGACCTTCTCCCTGCAGTACGGCAGTGGC
AGCCTCACTGGCTTCTTCGGTTACGACACCCTAAAGATCCAGAGCATCCAGGTCCCCGAC
CAGGAGTTCGGCCTGAGTGAGACAGAGCCAGGTACCAGTTTCCTGTATGCCCAGTTCGAT
GGCATCATGGGCCTGGCCTACCCCGACCTGTCTGCGGGTGGGGCCACCACTGCCATGCAG
GGCCTCCTGCAGGAGGATGCGCTCACCAGCCCAGTCTTCAGCTTCTACCTCAGCAACCAG
CAGAGCTCTCAGGACGGGGGAGAACTCGTCTTGGGGGGTGTGGACAGCAGCCTGTACACC
GGTCAGATCTACTGGGCCCCCGTCACTCAGGAGCTATACTGGCAGATTGGCATCGAGGAG
TTCCTCATTGGTGACGAGGCCTCTGGCTGGTGCTCTGAGGGCTGCCAGGCCATTGTGGAC
ACCGGCACGTCTCTGCTCACCGTGCCCCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCATCGGGACCCCACCACAGAACTTCCTGGTCCTTTTTGACACCGGCTCCTCCAATCTG
GGGGTGCCCTCTGTCTACTGCAAGAGCCTGGCCTGCACCACCCATGCCCGCTTCAACCCC
AGCAAGTCCTCTACCTACTCCACCGACAGGCAGACCTTCTCCCTGCAGTACGGCAGTGGC
AGCCTCACTGGCTTCTTCGGTTACGACACCCTAAAGATCCAGAGCATCCAGGTCCCCGAC
CAGGAGTTCGGCCTGAGTGAGACAGAGCCAGGTACCAGTTTCCTGTATGCCCAGTTCGAT
GGCATCATGGGCCTGGCCTACCCCGACCTGTCTGCGGGTGGGGCCACCACTGCCATGCAG
GGCCTCCTGCAGGAGGATGCGCTCACCAGCCCAGTCTTCAGCTTCTACCTCAGCAACCAG
CAGAGCTCTCAGGACGGGGGAGAACTCGTCTTGGGGGGTGTGGACAGCAGCCTGTACACC
GGTCAGATCTACTGGGCCCCCGTCACTCAGGAGCTATACTGGCAGATTGGCATCGAGGAG
TTCCTCATTGGTGACGAGGCCTCTGGCTGGTGCTCTGAGGGCTGCCAGGCCATTGTGGAC
ACCGGCACGTCTCTGCTCACCGTGCCCCAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|18203304|sp|Q9N2D3|PEPC_CALJA

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|18203304|sp|Q9N2D3|PEPC_CALJA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               209-415, gnl|bosTau2|chr23 (15275047-15274841)
               

               
               209-415, gnl|Hg17|chr6 (41818213-41818007)
               

               
               209-415, gnl|Mm7|chr17 (45867134-45867337)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               209-415, gnl|bosTau2|chr23 (15275047-15274841)
               

               
               209-415, gnl|Hg17|chr6 (41818213-41818007)
               

               
               209-415, gnl|Mm7|chr17 (45867134-45867337)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cst (0.140036)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.140036)

	209-415, gnl\|bosTau2\|chr23 (15275047-15274841)
	209-415, gnl\|Hg17\|chr6 (41818213-41818007)
	209-415, gnl\|Mm7\|chr17 (45867134-45867337)