Non-Coding RNA Search

rcte05_i19.y1

Sequence:


               
               GGATGGTGGCCCTGATGCAGCCATAAGAGACCAAGAAGCATGTTAGTGGGAGGGTGATGA
CTGCCAGTCCTACTGTGAAAATGACCAGCTCATTGAGGGATGTGTCTGAGCAGAAGAGCT
TGAGCAGAGCACCAAAGTCACAGAAGAAATGGGGAATGGTGTTGTCAGCACAAAAGACAG
CTGGGCTAGGAGGAGAGTGTGACAAAGGACATTGGCACAGGACAGAATCCAAGATACAGT
TACAAGTGGGAATGATGCCTCTAGCCTGAAGTATACAGAAGAGCCCATTCACAAGCCTCT
GATCTTTAAAGGTATAACACTTCCCATTCATATGGAGATAATAAGTTGCAGAACAAAAAA
TAACATTTGTCTCTTTGGAGGTTTTCAGGAGCACTGTGACCTGACCTATGTGGACAGCTG
CAAGAAGAAAAGATTCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGATGGTGGCCCTGATGCAGCCATAAGAGACCAAGAAGCATGTTAGTGGGAGGGTGATGA
CTGCCAGTCCTACTGTGAAAATGACCAGCTCATTGAGGGATGTGTCTGAGCAGAAGAGCT
TGAGCAGAGCACCAAAGTCACAGAAGAAATGGGGAATGGTGTTGTCAGCACAAAAGACAG
CTGGGCTAGGAGGAGAGTGTGACAAAGGACATTGGCACAGGACAGAATCCAAGATACAGT
TACAAGTGGGAATGATGCCTCTAGCCTGAAGTATACAGAAGAGCCCATTCACAAGCCTCT
GATCTTTAAAGGTATAACACTTCCCATTCATATGGAGATAATAAGTTGCAGAACAAAAAA
TAACATTTGTCTCTTTGGAGGTTTTCAGGAGCACTGTGACCTGACCTATGTGGACAGCTG
CAAGAAGAAAAGATTCCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|1142974|gb|AAC52391.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|1142974|gb|AAC52391.1|

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               1-246, gnl|bosTau2|chr11 (74315697-74315451)
               

               
               1-246, gnl|Hg17|chr9 (122353310-122353064)
               

               
               1-246, gnl|Mm7|chr2 (36858034-36857788)
               


               
               250-438, gnl|bosTau2|chr10 (33460033-33459845)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-246, gnl|bosTau2|chr11 (74315697-74315451)
               

               
               1-246, gnl|Hg17|chr9 (122353310-122353064)
               

               
               1-246, gnl|Mm7|chr2 (36858034-36857788)
               


               
               250-438, gnl|bosTau2|chr10 (33460033-33459845)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cte (0.29274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)

	1-246, gnl\|bosTau2\|chr11 (74315697-74315451)
	1-246, gnl\|Hg17\|chr9 (122353310-122353064)
	1-246, gnl\|Mm7\|chr2 (36858034-36857788)

	250-438, gnl\|bosTau2\|chr10 (33460033-33459845)