Non-Coding RNA Search

rcte12_c8.y1

Sequence:


               
               CTGACTCACCACTGTTTGCTCTCGCCAAGGAACAAGTCGGTCAGGAAGCTGCACAGCCAC
GGCTTTTAAAGATACCCAAAAGACTCCTGTGGAGCCGGAGGTGGCGATTCACTGGAATAG
AATCACCCTTACCAGCCACAGTGTGAAGACTTTGGAGCAGTTATGTGCTAACCTGATCAG
AGGTGCAAAGGAAAAGAATCTCAAAGTGAAAGGACTAGTTTGGATACCTACCAAGACTCT
GAGAGTAATTACAAGGAAAACTGCATGCGATGAAAATCCTAAGACTTGGGATCATTTTCA
GATGAGGGCCCGCAAGTGACTCATTGACCTGCACGGTCCTTCTGAGGTTGTTCAAAAGAT
CACATCCATCAGTATAGATCCAGGAGTAGAGGTTGAAGTCACAACTGCAGATGCTTAAGT
CTGCCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGACTCACCACTGTTTGCTCTCGCCAAGGAACAAGTCGGTCAGGAAGCTGCACAGCCAC
GGCTTTTAAAGATACCCAAAAGACTCCTGTGGAGCCGGAGGTGGCGATTCACTGGAATAG
AATCACCCTTACCAGCCACAGTGTGAAGACTTTGGAGCAGTTATGTGCTAACCTGATCAG
AGGTGCAAAGGAAAAGAATCTCAAAGTGAAAGGACTAGTTTGGATACCTACCAAGACTCT
GAGAGTAATTACAAGGAAAACTGCATGCGATGAAAATCCTAAGACTTGGGATCATTTTCA
GATGAGGGCCCGCAAGTGACTCATTGACCTGCACGGTCCTTCTGAGGTTGTTCAAAAGAT
CACATCCATCAGTATAGATCCAGGAGTAGAGGTTGAAGTCACAACTGCAGATGCTTAAGT
CTGCCTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|34872671|ref|XP_344115.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34872671|ref|XP_344115.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-427, gnl|bosTau2|chr10 (55974263-55974692)
               

               
               1-427, gnl|Hg17|chr5 (107957148-107957576)
               

               
               1-427, gnl|Mm7|chr4 (3762694-3761642)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-427, gnl|bosTau2|chr10 (55974263-55974692)
               

               
               1-427, gnl|Hg17|chr5 (107957148-107957576)
               

               
               1-427, gnl|Mm7|chr4 (3762694-3761642)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cte (0.29274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)

	1-427, gnl\|bosTau2\|chr10 (55974263-55974692)
	1-427, gnl\|Hg17\|chr5 (107957148-107957576)
	1-427, gnl\|Mm7\|chr4 (3762694-3761642)