Non-Coding RNA Search

rcte16_h7.y1

Sequence:


               
               TCTCGCTGACCTATTGGCATGGCAGTCTTTCTGTTCTGCCTGTTTCTGGTTAATTTCTCC
TTGCCTTGGTGGCTCTGGGATTCAATTGAACGAGCCTGTGAGTCTCAGCTATGTGCCAGG
TACAATGCTGGGTGAAAAAGGAGACAGGATCAACTAACTTAGAGTCCACCAGAGATGCAG
ATTCTGTTTTTAAGCAGTCCAGAGTTATCACCTTTTCTCAAAGGTGCAAATAAGTGAGCA
ATTTTATAAAGTGGGTCTCTGAAAGGGGCAACTCTCTGAAAGGAGAGTCGCTGGATATAT
TCCTAGGTGTCCACCAGTTNGTTTTAAAGATGAAATAAAAGAATTACTGTGAAAAAAAAA
AAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTCGCTGACCTATTGGCATGGCAGTCTTTCTGTTCTGCCTGTTTCTGGTTAATTTCTCC
TTGCCTTGGTGGCTCTGGGATTCAATTGAACGAGCCTGTGAGTCTCAGCTATGTGCCAGG
TACAATGCTGGGTGAAAAAGGAGACAGGATCAACTAACTTAGAGTCCACCAGAGATGCAG
ATTCTGTTTTTAAGCAGTCCAGAGTTATCACCTTTTCTCAAAGGTGCAAATAAGTGAGCA
ATTTTATAAAGTGGGTCTCTGAAAGGGGCAACTCTCTGAAAGGAGAGTCGCTGGATATAT
TCCTAGGTGTCCACCAGTTNGTTTTAAAGATGAAATAAAAGAATTACTGTGAAAAAAAAA
AAAAAAAAAA

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               1-266, gnl|bosTau2|chr4 (8039352-8039088)
               

               
               1-266, gnl|canFam2|chr14 (34101169-34101421)
               

               
               1-266, gnl|echTel1|scaffold_214668 (7760-7542)
               

               
               1-266, gnl|hg17|chr7 (16456920-16457136)
               

               
               1-266, gnl|mm7|chr12 (33998405-33998202)
               

               
               1-266, gnl|Mm7|chr12 (33998215-33998465)
               

               
               1-266, gnl|panTro1|chr6 (17341561-17341777)
               

               
               1-266, gnl|rheMac2|chr3 (109468855-109468646)
               

               
               1-266, gnl|rn3|chr6 (54886450-54886269)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-266, gnl|bosTau2|chr4 (8039352-8039088)
               

               
               1-266, gnl|canFam2|chr14 (34101169-34101421)
               

               
               1-266, gnl|echTel1|scaffold_214668 (7760-7542)
               

               
               1-266, gnl|hg17|chr7 (16456920-16457136)
               

               
               1-266, gnl|mm7|chr12 (33998405-33998202)
               

               
               1-266, gnl|Mm7|chr12 (33998215-33998465)
               

               
               1-266, gnl|panTro1|chr6 (17341561-17341777)
               

               
               1-266, gnl|rheMac2|chr3 (109468855-109468646)
               

               
               1-266, gnl|rn3|chr6 (54886450-54886269)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cte (0.29274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)

	1-266, gnl\|bosTau2\|chr4 (8039352-8039088)
	1-266, gnl\|canFam2\|chr14 (34101169-34101421)
	1-266, gnl\|echTel1\|scaffold_214668 (7760-7542)
	1-266, gnl\|hg17\|chr7 (16456920-16457136)
	1-266, gnl\|mm7\|chr12 (33998405-33998202)
	1-266, gnl\|Mm7\|chr12 (33998215-33998465)
	1-266, gnl\|panTro1\|chr6 (17341561-17341777)
	1-266, gnl\|rheMac2\|chr3 (109468855-109468646)
	1-266, gnl\|rn3\|chr6 (54886450-54886269)