Non-Coding RNA Search

rcte17_n14.y1

Sequence:


               
               ATATACTTACTGTGTCTCTAGTCAAAGCAATGAGAGACAGGATGGAGAAGCAAAGGGGCA
CCATGAAATCAACACGTCACTCAACATAGGAGAGTGGACGGGGTAGACGCAAGAAGACCA
ATGGTTAAGAAGCTATTGTCTACAAGAGAGGATGGAGCTAACCCAGATGAGAGAAATGCA
TGGATTTCAGAGGCACTAAGGATGTAAAAGCAGTGAAGGTCTGGATGGTATCCTATCTTC
GTTATTTACTCAAAGAAATGCTTTGGTTTTGCCTAAGAATGCCTTATTGGTTAATTACTT
GCACACATAAAAAACATCACACAAAAGTCAGACTTCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATATACTTACTGTGTCTCTAGTCAAAGCAATGAGAGACAGGATGGAGAAGCAAAGGGGCA
CCATGAAATCAACACGTCACTCAACATAGGAGAGTGGACGGGGTAGACGCAAGAAGACCA
ATGGTTAAGAAGCTATTGTCTACAAGAGAGGATGGAGCTAACCCAGATGAGAGAAATGCA
TGGATTTCAGAGGCACTAAGGATGTAAAAGCAGTGAAGGTCTGGATGGTATCCTATCTTC
GTTATTTACTCAAAGAAATGCTTTGGTTTTGCCTAAGAATGCCTTATTGGTTAATTACTT
GCACACATAAAAAACATCACACAAAAGTCAGACTTCTTT

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

Help | Less info


               
               89-288, gnl|bosTau2|chr17 (4254810-4255011)
               

               
               89-288, gnl|canFam2|chr15 (52409277-52409478)
               

               
               89-288, gnl|dasNov1|scaffold_12057 (979-745)
               

               
               89-288, gnl|hg17|chr4 (152707103-152707307)
               

               
               89-288, gnl|Hg17|chr4 (152707280-152707102)
               

               
               89-288, gnl|loxAfr1|scaffold_22144 (15724-15943)
               

               
               89-288, gnl|mm7|chr3 (85980625-85980418)
               

               
               89-288, gnl|Mm7|chr3 (85980447-85980622)
               

               
               89-288, gnl|oryCun1|scaffold_85497 (5173-4944)
               

               
               89-288, gnl|panTro1|chr3 (170017545-170017749)
               

               
               89-288, gnl|rheMac2|chr5 (143669624-143669828)
               

               
               89-288, gnl|rn3|chr2 (177751374-177751169)

Aligned organism(s): 12 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               89-288, gnl|bosTau2|chr17 (4254810-4255011)
               

               
               89-288, gnl|canFam2|chr15 (52409277-52409478)
               

               
               89-288, gnl|dasNov1|scaffold_12057 (979-745)
               

               
               89-288, gnl|hg17|chr4 (152707103-152707307)
               

               
               89-288, gnl|Hg17|chr4 (152707280-152707102)
               

               
               89-288, gnl|loxAfr1|scaffold_22144 (15724-15943)
               

               
               89-288, gnl|mm7|chr3 (85980625-85980418)
               

               
               89-288, gnl|Mm7|chr3 (85980447-85980622)
               

               
               89-288, gnl|oryCun1|scaffold_85497 (5173-4944)
               

               
               89-288, gnl|panTro1|chr3 (170017545-170017749)
               

               
               89-288, gnl|rheMac2|chr5 (143669624-143669828)
               

               
               89-288, gnl|rn3|chr2 (177751374-177751169)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cte (0.29274)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)

	89-288, gnl\|bosTau2\|chr17 (4254810-4255011)
	89-288, gnl\|canFam2\|chr15 (52409277-52409478)
	89-288, gnl\|dasNov1\|scaffold_12057 (979-745)
	89-288, gnl\|hg17\|chr4 (152707103-152707307)
	89-288, gnl\|Hg17\|chr4 (152707280-152707102)
	89-288, gnl\|loxAfr1\|scaffold_22144 (15724-15943)
	89-288, gnl\|mm7\|chr3 (85980625-85980418)
	89-288, gnl\|Mm7\|chr3 (85980447-85980622)
	89-288, gnl\|oryCun1\|scaffold_85497 (5173-4944)
	89-288, gnl\|panTro1\|chr3 (170017545-170017749)
	89-288, gnl\|rheMac2\|chr5 (143669624-143669828)
	89-288, gnl\|rn3\|chr2 (177751374-177751169)