Non-Coding RNA Search

rcte21_e22.y1

Sequence:


               
               GTGCTGCAATTATCTTGGTCTTCGCATTCTTGGCGGGTGGAAACGGCTTCCCAGCAGAGT
GACGGCCTGTGCAGCTCAGAGCCTGACGGGCTTCGCCCGGAGTCTGTTGTACAAGCTGCT
CCCCACACCACCGTGGAGACCTTTCCTACCCAGGAACTCAAGGATGAAACCCGTGCATGA
GACTTCAGAGTGAGGAGTGAGAGGAGCGCGTGTGAAATGCTGGCGGTTCCTCGTCAGACA
GATTTTCTCTGCTCCACGAGAGCCTGCTTCAGATGCTCCTGTCACTCACGGAAGTGAGCC
CTCTGAGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCTGCAATTATCTTGGTCTTCGCATTCTTGGCGGGTGGAAACGGCTTCCCAGCAGAGT
GACGGCCTGTGCAGCTCAGAGCCTGACGGGCTTCGCCCGGAGTCTGTTGTACAAGCTGCT
CCCCACACCACCGTGGAGACCTTTCCTACCCAGGAACTCAAGGATGAAACCCGTGCATGA
GACTTCAGAGTGAGGAGTGAGAGGAGCGCGTGTGAAATGCTGGCGGTTCCTCGTCAGACA
GATTTTCTCTGCTCCACGAGAGCCTGCTTCAGATGCTCCTGTCACTCACGGAAGTGAGCC
CTCTGAGGCT

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

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               2-310, gnl|bosTau2|chr11 (84631677-84631985)
               

               
               2-310, gnl|canFam2|chr9 (56476684-56476068)
               

               
               2-310, gnl|dasNov1|scaffold_12565 (12650-13280)
               

               
               2-310, gnl|echTel1|scaffold_170241 (5956-6557)
               

               
               2-310, gnl|galGal2|chr17 (4831876-4831243)
               

               
               2-310, gnl|hg17|chr9 (130778596-130779227)
               

               
               2-310, gnl|Hg17|chr9 (130778610-130778918)
               

               
               2-310, gnl|loxAfr1|scaffold_3752 (22805-22195)
               

               
               2-310, gnl|mm7|chr2 (31798589-31799201)
               

               
               2-310, gnl|Mm7|chr2 (31798603-31798908)
               

               
               2-310, gnl|monDom2|scaffold_51 (6218304-6218926)
               

               
               2-310, gnl|oryCun1|scaffold_167863 (9261-8662)
               

               
               2-310, gnl|panTro1|chr11 (115654956-115655587)
               

               
               2-310, gnl|rheMac2|chr15 (7930163-7929534)
               

               
               2-310, gnl|rn3|chr3 (10791345-10791963)

Aligned organism(s): 15 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-310, gnl|bosTau2|chr11 (84631677-84631985)
               

               
               2-310, gnl|canFam2|chr9 (56476684-56476068)
               

               
               2-310, gnl|dasNov1|scaffold_12565 (12650-13280)
               

               
               2-310, gnl|echTel1|scaffold_170241 (5956-6557)
               

               
               2-310, gnl|galGal2|chr17 (4831876-4831243)
               

               
               2-310, gnl|hg17|chr9 (130778596-130779227)
               

               
               2-310, gnl|Hg17|chr9 (130778610-130778918)
               

               
               2-310, gnl|loxAfr1|scaffold_3752 (22805-22195)
               

               
               2-310, gnl|mm7|chr2 (31798589-31799201)
               

               
               2-310, gnl|Mm7|chr2 (31798603-31798908)
               

               
               2-310, gnl|monDom2|scaffold_51 (6218304-6218926)
               

               
               2-310, gnl|oryCun1|scaffold_167863 (9261-8662)
               

               
               2-310, gnl|panTro1|chr11 (115654956-115655587)
               

               
               2-310, gnl|rheMac2|chr15 (7930163-7929534)
               

               
               2-310, gnl|rn3|chr3 (10791345-10791963)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cte (0.29274)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)

	2-310, gnl\|bosTau2\|chr11 (84631677-84631985)
	2-310, gnl\|canFam2\|chr9 (56476684-56476068)
	2-310, gnl\|dasNov1\|scaffold_12565 (12650-13280)
	2-310, gnl\|echTel1\|scaffold_170241 (5956-6557)
	2-310, gnl\|galGal2\|chr17 (4831876-4831243)
	2-310, gnl\|hg17\|chr9 (130778596-130779227)
	2-310, gnl\|Hg17\|chr9 (130778610-130778918)
	2-310, gnl\|loxAfr1\|scaffold_3752 (22805-22195)
	2-310, gnl\|mm7\|chr2 (31798589-31799201)
	2-310, gnl\|Mm7\|chr2 (31798603-31798908)
	2-310, gnl\|monDom2\|scaffold_51 (6218304-6218926)
	2-310, gnl\|oryCun1\|scaffold_167863 (9261-8662)
	2-310, gnl\|panTro1\|chr11 (115654956-115655587)
	2-310, gnl\|rheMac2\|chr15 (7930163-7929534)
	2-310, gnl\|rn3\|chr3 (10791345-10791963)