Non-Coding RNA Search

rcte24_d19.y1

Sequence:


               
               gccgtgagctgcggtatagatcgcagacaaagctcagatctggcattgctgtggctttgg
cgtaggcctgtagctacaactcctattggacccctcgcctgggaacttcaatatgccgTT
GGGTGCAGCCCTAAAAAAAAAAATAGAAAGAAATATCCAACCCCTAACATCAACAGTGCC
AAGGATGAGAAACCCAGATACATGCATCGTGTCATGACAGTGTGCTTGTTCACGTGGAGA
AAGTACTAAGCTTTACTGACTACCTCCCATGAGTAAGGACTTAGAGCTAGTGCTTCCCAT
AGTTCAGTTAATCCTTTCAATAATCCTGGGAAATACTCCCAGGTGTGAACACTGAGGTTT
ACAGAGGAAAAGCCATTTGCTCAGTTTGACAGAATAATGCTTGCTCATCTGACTCCACAG
ACTATGATTCTATCACTTGTCTGAGAGGCAGAAGTGATTTTCCTCCTGGACTAACAACTT
TATTTACTTTAATACCAGCATCTTTGCTCCAGGTCTCCTGAATGCTCAAGTTGGAGGTAG
CCTACCCATGCACAGATAGCCTAAAAAGCAAAATTGAACTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               gccgtgagctgcggtatagatcgcagacaaagctcagatctggcattgctgtggctttgg
cgtaggcctgtagctacaactcctattggacccctcgcctgggaacttcaatatgccgTT
GGGTGCAGCCCTAAAAAAAAAAATAGAAAGAAATATCCAACCCCTAACATCAACAGTGCC
AAGGATGAGAAACCCAGATACATGCATCGTGTCATGACAGTGTGCTTGTTCACGTGGAGA
AAGTACTAAGCTTTACTGACTACCTCCCATGAGTAAGGACTTAGAGCTAGTGCTTCCCAT
AGTTCAGTTAATCCTTTCAATAATCCTGGGAAATACTCCCAGGTGTGAACACTGAGGTTT
ACAGAGGAAAAGCCATTTGCTCAGTTTGACAGAATAATGCTTGCTCATCTGACTCCACAG
ACTATGATTCTATCACTTGTCTGAGAGGCAGAAGTGATTTTCCTCCTGGACTAACAACTT
TATTTACTTTAATACCAGCATCTTTGCTCCAGGTCTCCTGAATGCTCAAGTTGGAGGTAG
CCTACCCATGCACAGATAGCCTAAAAAGCAAAATTGAACTGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               147-567, gnl|bosTau2|chr6 (7306388-7306791)
               

               
               147-567, gnl|Hg17|chr4 (103798367-103797951)
               

               
               147-567, gnl|Mm7|chr3 (135467374-135467782)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               147-567, gnl|bosTau2|chr6 (7306388-7306791)
               

               
               147-567, gnl|Hg17|chr4 (103798367-103797951)
               

               
               147-567, gnl|Mm7|chr3 (135467374-135467782)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cte (0.29274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)

	147-567, gnl\|bosTau2\|chr6 (7306388-7306791)
	147-567, gnl\|Hg17\|chr4 (103798367-103797951)
	147-567, gnl\|Mm7\|chr3 (135467374-135467782)