Non-Coding RNA Search

rcte36_k20.y1

Sequence:


               
               AATCGCACGAGGATGATTTAAAGCTGTATAAAAATATTTTCTCTTGTATTTCAATGTGCT
AACATCTTTACATGTCACGTGTTATGAAAATTTTTCATATGCACTAAACTAATAATTTAA
AATAAAATTTTGGTTCAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATCGCACGAGGATGATTTAAAGCTGTATAAAAATATTTTCTCTTGTATTTCAATGTGCT
AACATCTTTACATGTCACGTGTTATGAAAATTTTTCATATGCACTAAACTAATAATTTAA
AATAAAATTTTGGTTCAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

Help | Less info


               
               14-140, gnl|bosTau2|chr10 (11715713-11715584)
               

               
               14-140, gnl|canFam2|chr30 (35896582-35896826)
               

               
               14-140, gnl|hg17|chr15 (67026074-67026320)
               

               
               14-140, gnl|Hg17|chr15 (67026075-67026204)
               

               
               14-140, gnl|loxAfr1|scaffold_17140 (1146-898)
               

               
               14-140, gnl|mm7|chr9 (62299102-62298880)
               

               
               14-140, gnl|Mm7|chr9 (62299096-62298969)
               

               
               14-140, gnl|monDom2|scaffold_12 (42818513-42818261)
               

               
               14-140, gnl|oryCun1|scaffold_100908 (5249-5003)
               

               
               14-140, gnl|panTro1|chr16 (67544966-67545212)
               

               
               14-140, gnl|rheMac2|chr7 (47568218-47568464)
               

               
               14-140, gnl|rn3|chr8 (66427774-66427554)

Aligned organism(s): 12 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-140, gnl|bosTau2|chr10 (11715713-11715584)
               

               
               14-140, gnl|canFam2|chr30 (35896582-35896826)
               

               
               14-140, gnl|hg17|chr15 (67026074-67026320)
               

               
               14-140, gnl|Hg17|chr15 (67026075-67026204)
               

               
               14-140, gnl|loxAfr1|scaffold_17140 (1146-898)
               

               
               14-140, gnl|mm7|chr9 (62299102-62298880)
               

               
               14-140, gnl|Mm7|chr9 (62299096-62298969)
               

               
               14-140, gnl|monDom2|scaffold_12 (42818513-42818261)
               

               
               14-140, gnl|oryCun1|scaffold_100908 (5249-5003)
               

               
               14-140, gnl|panTro1|chr16 (67544966-67545212)
               

               
               14-140, gnl|rheMac2|chr7 (47568218-47568464)
               

               
               14-140, gnl|rn3|chr8 (66427774-66427554)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cte (0.29274)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)

	14-140, gnl\|bosTau2\|chr10 (11715713-11715584)
	14-140, gnl\|canFam2\|chr30 (35896582-35896826)
	14-140, gnl\|hg17\|chr15 (67026074-67026320)
	14-140, gnl\|Hg17\|chr15 (67026075-67026204)
	14-140, gnl\|loxAfr1\|scaffold_17140 (1146-898)
	14-140, gnl\|mm7\|chr9 (62299102-62298880)
	14-140, gnl\|Mm7\|chr9 (62299096-62298969)
	14-140, gnl\|monDom2\|scaffold_12 (42818513-42818261)
	14-140, gnl\|oryCun1\|scaffold_100908 (5249-5003)
	14-140, gnl\|panTro1\|chr16 (67544966-67545212)
	14-140, gnl\|rheMac2\|chr7 (47568218-47568464)
	14-140, gnl\|rn3\|chr8 (66427774-66427554)