Non-Coding RNA Search

rcte40_a11.y1

Sequence:


               
               TTCCCTCTGCCCTAAAAGCCAGCAGGAAAGCTTATCTGTCTCTGCCAGCAGTTCACGTGA
GTTTGGACTCTAAATTTATCCTACCTGAGTCACCAGGCAGAAATAAATATGAAAGGCTCT
GAAGACACTTCAACAACACAGACCACATAGGATTTTCCATAGGACTCACAGGAGTGGCGG
GGAGGAGGCCCTCTTAATTTGAGTTCATAATCGAAAATTACAAAGTGCATGAGGAAACTG
TCTGTCCCAAGCAGAATGAAGCAGACACACCATGAGGATCATTAAAACCTAAGGACACAA
GTTAAAAAAAACCTAAAGACAAAATGAAGAAATCAACACAGTAAGAAAAAGAAAGACAGG
AAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCCCTCTGCCCTAAAAGCCAGCAGGAAAGCTTATCTGTCTCTGCCAGCAGTTCACGTGA
GTTTGGACTCTAAATTTATCCTACCTGAGTCACCAGGCAGAAATAAATATGAAAGGCTCT
GAAGACACTTCAACAACACAGACCACATAGGATTTTCCATAGGACTCACAGGAGTGGCGG
GGAGGAGGCCCTCTTAATTTGAGTTCATAATCGAAAATTACAAAGTGCATGAGGAAACTG
TCTGTCCCAAGCAGAATGAAGCAGACACACCATGAGGATCATTAAAACCTAAGGACACAA
GTTAAAAAAAACCTAAAGACAAAATGAAGAAATCAACACAGTAAGAAAAAGAAAGACAGG
AAAAAAA

Aligned organism(s): 10 entry(ies)

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Aligned organism(s): 10 entry(ies)

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               3-367, gnl|bosTau2|chr11 (65107378-65107744)
               

               
               3-367, gnl|canFam2|chr17 (12355392-12355783)
               

               
               3-367, gnl|hg17|chr2 (12998359-12998810)
               

               
               3-367, gnl|Hg17|chr2 (12999062-12998551)
               

               
               3-367, gnl|mm7|chr12 (15687198-15686687)
               

               
               3-367, gnl|Mm7|chr12 (15686579-15686943)
               

               
               3-367, gnl|oryCun1|scaffold_208698 (102513-102024)
               

               
               3-367, gnl|panTro1|chr12 (13751005-13751456)
               

               
               3-367, gnl|rheMac2|chr13 (12952635-12953078)
               

               
               3-367, gnl|rn3|chr6 (39330875-39330370)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-367, gnl|bosTau2|chr11 (65107378-65107744)
               

               
               3-367, gnl|canFam2|chr17 (12355392-12355783)
               

               
               3-367, gnl|hg17|chr2 (12998359-12998810)
               

               
               3-367, gnl|Hg17|chr2 (12999062-12998551)
               

               
               3-367, gnl|mm7|chr12 (15687198-15686687)
               

               
               3-367, gnl|Mm7|chr12 (15686579-15686943)
               

               
               3-367, gnl|oryCun1|scaffold_208698 (102513-102024)
               

               
               3-367, gnl|panTro1|chr12 (13751005-13751456)
               

               
               3-367, gnl|rheMac2|chr13 (12952635-12953078)
               

               
               3-367, gnl|rn3|chr6 (39330875-39330370)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cte (0.29274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)

	3-367, gnl\|bosTau2\|chr11 (65107378-65107744)
	3-367, gnl\|canFam2\|chr17 (12355392-12355783)
	3-367, gnl\|hg17\|chr2 (12998359-12998810)
	3-367, gnl\|Hg17\|chr2 (12999062-12998551)
	3-367, gnl\|mm7\|chr12 (15687198-15686687)
	3-367, gnl\|Mm7\|chr12 (15686579-15686943)
	3-367, gnl\|oryCun1\|scaffold_208698 (102513-102024)
	3-367, gnl\|panTro1\|chr12 (13751005-13751456)
	3-367, gnl\|rheMac2\|chr13 (12952635-12953078)
	3-367, gnl\|rn3\|chr6 (39330875-39330370)