Non-Coding RNA Search

rcut08_i3.y1

Sequence:


               
               CTGACCTTTCCTTTCTGAAATCTGCTGTGTTTTCCATGATGCTAATTGAGTCCCTCTCTA
GACCTAATCAAAGAGCTGGTTGCACACACACACACACACGCTTGCTGTCCTGGCTGGGCT
CAGTTCATGGAGCAACTTGAAAAGGCTGGAATTTGCATGGAAACACCCACTCTGTGGTCC
AACTGGCTGGTCCTTGTTTAAAAACGAATAAGTTCTGCTTTCAGATTTGCTGCCCAGTCC
TGTTAAGAGTCCCACACCCTCTCCACCACCATCAACAAGGAAAGATCAGTGGGTAGGGGA
GTAATAGCAATACCCTTTGTGCACAATGGACAATGCGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGACCTTTCCTTTCTGAAATCTGCTGTGTTTTCCATGATGCTAATTGAGTCCCTCTCTA
GACCTAATCAAAGAGCTGGTTGCACACACACACACACACGCTTGCTGTCCTGGCTGGGCT
CAGTTCATGGAGCAACTTGAAAAGGCTGGAATTTGCATGGAAACACCCACTCTGTGGTCC
AACTGGCTGGTCCTTGTTTAAAAACGAATAAGTTCTGCTTTCAGATTTGCTGCCCAGTCC
TGTTAAGAGTCCCACACCCTCTCCACCACCATCAACAAGGAAAGATCAGTGGGTAGGGGA
GTAATAGCAATACCCTTTGTGCACAATGGACAATGCGTCC

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               1-305, gnl|bosTau2|chr19 (4724880-4725181)
               

               
               1-305, gnl|canFam2|chr9 (37231342-37232260)
               

               
               1-305, gnl|dasNov1|scaffold_15913 (44956-45861)
               

               
               1-305, gnl|echTel1|scaffold_319938 (41730-42672)
               

               
               1-305, gnl|hg17|chr17 (54803893-54804840)
               

               
               1-305, gnl|Hg17|chr17 (54804472-54804812)
               

               
               1-305, gnl|loxAfr1|scaffold_1347 (35548-36505)
               

               
               1-305, gnl|mm7|chr11 (87028745-87027884)
               

               
               1-305, gnl|Mm7|chr11 (87028218-87027910)
               

               
               1-305, gnl|monDom2|scaffold_56 (3299638-3298616)
               

               
               1-305, gnl|oryCun1|scaffold_210164 (58199-59130)
               

               
               1-305, gnl|panTro1|chr19_random (40550982-40551929)
               

               
               1-305, gnl|rheMac2|chr16 (43606276-43607229)
               

               
               1-305, gnl|rn3|chr10 (75242662-75241787)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-305, gnl|bosTau2|chr19 (4724880-4725181)
               

               
               1-305, gnl|canFam2|chr9 (37231342-37232260)
               

               
               1-305, gnl|dasNov1|scaffold_15913 (44956-45861)
               

               
               1-305, gnl|echTel1|scaffold_319938 (41730-42672)
               

               
               1-305, gnl|hg17|chr17 (54803893-54804840)
               

               
               1-305, gnl|Hg17|chr17 (54804472-54804812)
               

               
               1-305, gnl|loxAfr1|scaffold_1347 (35548-36505)
               

               
               1-305, gnl|mm7|chr11 (87028745-87027884)
               

               
               1-305, gnl|Mm7|chr11 (87028218-87027910)
               

               
               1-305, gnl|monDom2|scaffold_56 (3299638-3298616)
               

               
               1-305, gnl|oryCun1|scaffold_210164 (58199-59130)
               

               
               1-305, gnl|panTro1|chr19_random (40550982-40551929)
               

               
               1-305, gnl|rheMac2|chr16 (43606276-43607229)
               

               
               1-305, gnl|rn3|chr10 (75242662-75241787)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cut (0.169924)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)

	1-305, gnl\|bosTau2\|chr19 (4724880-4725181)
	1-305, gnl\|canFam2\|chr9 (37231342-37232260)
	1-305, gnl\|dasNov1\|scaffold_15913 (44956-45861)
	1-305, gnl\|echTel1\|scaffold_319938 (41730-42672)
	1-305, gnl\|hg17\|chr17 (54803893-54804840)
	1-305, gnl\|Hg17\|chr17 (54804472-54804812)
	1-305, gnl\|loxAfr1\|scaffold_1347 (35548-36505)
	1-305, gnl\|mm7\|chr11 (87028745-87027884)
	1-305, gnl\|Mm7\|chr11 (87028218-87027910)
	1-305, gnl\|monDom2\|scaffold_56 (3299638-3298616)
	1-305, gnl\|oryCun1\|scaffold_210164 (58199-59130)
	1-305, gnl\|panTro1\|chr19_random (40550982-40551929)
	1-305, gnl\|rheMac2\|chr16 (43606276-43607229)
	1-305, gnl\|rn3\|chr10 (75242662-75241787)