Non-Coding RNA Search

rcut09_p6.y1

Sequence:


               
               TTAGGGTCTGCAATTCTGGAGAGTCCAGGCAAAACAAGGAAAGGAGAACTCTTTTGTAAA
GGGGAAAAGGAATTTGGGAGAGCTACAGTAAACAAAGGGTCCAGAGCTTTTCATTGGCTC
AGTCCTTGTCAGGAAGGATGAGGAATTCTTCTTCCTGTTGGGCTTTGTTATCATTGCAGA
GTGTGAGAGCTCCCCCTGCTGGTCTTCTGACTTTGTTTAATTGAGGTTTCTGTTTATTAG
TTTTTTACAGTTCCAACCTCAGCCCTCACATCCCAGACCTACCAGTATCTATTTGTTCTT
TTCTTTCTTGTCAAAAGTAGGTTTTCTGggagttcccctcatgactcagtggtaaagaac
ctggctagtatccatgaggacgtgggtttgatccctggcctcactcagtgggttaaggat
atggtattgctgtggctgtggtgtaggtcAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAGGGTCTGCAATTCTGGAGAGTCCAGGCAAAACAAGGAAAGGAGAACTCTTTTGTAAA
GGGGAAAAGGAATTTGGGAGAGCTACAGTAAACAAAGGGTCCAGAGCTTTTCATTGGCTC
AGTCCTTGTCAGGAAGGATGAGGAATTCTTCTTCCTGTTGGGCTTTGTTATCATTGCAGA
GTGTGAGAGCTCCCCCTGCTGGTCTTCTGACTTTGTTTAATTGAGGTTTCTGTTTATTAG
TTTTTTACAGTTCCAACCTCAGCCCTCACATCCCAGACCTACCAGTATCTATTTGTTCTT
TTCTTTCTTGTCAAAAGTAGGTTTTCTGggagttcccctcatgactcagtggtaaagaac
ctggctagtatccatgaggacgtgggtttgatccctggcctcactcagtgggttaaggat
atggtattgctgtggctgtggtgtaggtcAGC

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

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               30-256, gnl|bosTau2|chr14 (22467763-22467535)
               

               
               30-256, gnl|canFam2|chr21 (52489384-52489890)
               

               
               30-256, gnl|hg17|chr11 (28937232-28937713)
               

               
               30-256, gnl|loxAfr1|scaffold_30980 (22803-23286)
               

               
               30-256, gnl|oryCun1|scaffold_205156 (75365-75803)
               

               
               30-256, gnl|panTro1|chr9 (29254258-29254729)
               

               
               30-256, gnl|rheMac2|chr14 (42806655-42806177)

Aligned organism(s): 7 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               30-256, gnl|bosTau2|chr14 (22467763-22467535)
               

               
               30-256, gnl|canFam2|chr21 (52489384-52489890)
               

               
               30-256, gnl|hg17|chr11 (28937232-28937713)
               

               
               30-256, gnl|loxAfr1|scaffold_30980 (22803-23286)
               

               
               30-256, gnl|oryCun1|scaffold_205156 (75365-75803)
               

               
               30-256, gnl|panTro1|chr9 (29254258-29254729)
               

               
               30-256, gnl|rheMac2|chr14 (42806655-42806177)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cut (0.169924)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)

	30-256, gnl\|bosTau2\|chr14 (22467763-22467535)
	30-256, gnl\|canFam2\|chr21 (52489384-52489890)
	30-256, gnl\|hg17\|chr11 (28937232-28937713)
	30-256, gnl\|loxAfr1\|scaffold_30980 (22803-23286)
	30-256, gnl\|oryCun1\|scaffold_205156 (75365-75803)
	30-256, gnl\|panTro1\|chr9 (29254258-29254729)
	30-256, gnl\|rheMac2\|chr14 (42806655-42806177)