Non-Coding RNA Search

rcut14_k1.y1

Sequence:


               
               ACTAAGTTAGGATGGTTGGCGGGTCCAATAGGGCTGGGGCTGAGGGCTGGGGCGCTAGGG
GTCCCCATGTGAAAACAGAAGAAGGAAAACATAGGGCTCAAGGAACAGAAAGGAACCTCG
GCTATTTTCCGGACTCTAGCCCTCAAAGCGCCCCAGAGCCACCCTGATTTCTCCAAGGAA
AATTAGCAGAGTTTCCCCTTGAGGTTAAGGAAGTCATCTAGGAAATTCCAGAGGTGAAGT
GGAAAAAAAGGAAGGATGTCTCTCCCTTTGGGGTGaaataataaaataaaataattagaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaa

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTAAGTTAGGATGGTTGGCGGGTCCAATAGGGCTGGGGCTGAGGGCTGGGGCGCTAGGG
GTCCCCATGTGAAAACAGAAGAAGGAAAACATAGGGCTCAAGGAACAGAAAGGAACCTCG
GCTATTTTCCGGACTCTAGCCCTCAAAGCGCCCCAGAGCCACCCTGATTTCTCCAAGGAA
AATTAGCAGAGTTTCCCCTTGAGGTTAAGGAAGTCATCTAGGAAATTCCAGAGGTGAAGT
GGAAAAAAAGGAAGGATGTCTCTCCCTTTGGGGTGaaataataaaataaaataattagaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaa

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               9-289, gnl|bosTau2|chr5 (16832456-16832733)
               

               
               9-289, gnl|canFam2|chr27 (4282973-4282215)
               

               
               9-289, gnl|dasNov1|scaffold_3122 (62735-63527)
               

               
               9-289, gnl|echTel1|scaffold_314778 (65822-66541)
               

               
               9-289, gnl|hg17|chr12 (52661379-52662105)
               

               
               9-289, gnl|Hg17|chr12 (52661841-52661570)
               

               
               9-289, gnl|loxAfr1|scaffold_12227 (20601-21336)
               

               
               9-289, gnl|mm7|chr15 (102949094-102949793)
               

               
               9-289, gnl|Mm7|chr15 (102949541-102949286)
               

               
               9-289, gnl|panTro1|chr10 (53910280-53911006)
               

               
               9-289, gnl|rheMac2|chr11 (51079429-51080157)
               

               
               9-289, gnl|rn3|chr7 (141805394-141806101)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-289, gnl|bosTau2|chr5 (16832456-16832733)
               

               
               9-289, gnl|canFam2|chr27 (4282973-4282215)
               

               
               9-289, gnl|dasNov1|scaffold_3122 (62735-63527)
               

               
               9-289, gnl|echTel1|scaffold_314778 (65822-66541)
               

               
               9-289, gnl|hg17|chr12 (52661379-52662105)
               

               
               9-289, gnl|Hg17|chr12 (52661841-52661570)
               

               
               9-289, gnl|loxAfr1|scaffold_12227 (20601-21336)
               

               
               9-289, gnl|mm7|chr15 (102949094-102949793)
               

               
               9-289, gnl|Mm7|chr15 (102949541-102949286)
               

               
               9-289, gnl|panTro1|chr10 (53910280-53911006)
               

               
               9-289, gnl|rheMac2|chr11 (51079429-51080157)
               

               
               9-289, gnl|rn3|chr7 (141805394-141806101)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               cut (0.169924)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)

	9-289, gnl\|bosTau2\|chr5 (16832456-16832733)
	9-289, gnl\|canFam2\|chr27 (4282973-4282215)
	9-289, gnl\|dasNov1\|scaffold_3122 (62735-63527)
	9-289, gnl\|echTel1\|scaffold_314778 (65822-66541)
	9-289, gnl\|hg17\|chr12 (52661379-52662105)
	9-289, gnl\|Hg17\|chr12 (52661841-52661570)
	9-289, gnl\|loxAfr1\|scaffold_12227 (20601-21336)
	9-289, gnl\|mm7\|chr15 (102949094-102949793)
	9-289, gnl\|Mm7\|chr15 (102949541-102949286)
	9-289, gnl\|panTro1\|chr10 (53910280-53911006)
	9-289, gnl\|rheMac2\|chr11 (51079429-51080157)
	9-289, gnl\|rn3\|chr7 (141805394-141806101)