Non-Coding RNA Search

rcut18_o21.y1

Sequence:


               
               GAAATACGTGTGCAGGTGTTTTTTAAAATTTTTTACTTTTCATTTCTGTTTTATGCTTTT
TACTGTAGAAAATGTAGATGCCTTTTCACAACAAGTTTCTTCTTTGAAGCTTTAGGTTTT
GGTTTCATGCTTCTAGGTGGCAAGTTTTAAATAGCTCCCATGATATTCCCTGACAGCTGA
GACCTAGTATTAAGTGGAGAGGATTATAACCCTGGGCATTCCAGCTCTCAATCCACCTCG
CCAGTGGCTTTCAATCTTGTTTTTTGTTTTTGTTTTCATTTTTGTTTTTTACTGTGACTT
GTAAAAAATACATTTTATAggagttttcttgtggagcagtgggctagagatctggtgttg
tcactgcaacagcttaggctgctgctgtggcttgggttcgatccctggcctgggagcttc
cacatgAGGCCAAAAAAAAATTTTTTTTTTAACATTGCAAGCCACTACGCATGAGAATAT
TTACTTAAAAAAATTATTTTAGAATATTTCATGAAACATTACTTACCCTAACTACATGTG
ATGTAGTCTATTTCCTGTTTAACTAATTCTCTTCTCTTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAATACGTGTGCAGGTGTTTTTTAAAATTTTTTACTTTTCATTTCTGTTTTATGCTTTT
TACTGTAGAAAATGTAGATGCCTTTTCACAACAAGTTTCTTCTTTGAAGCTTTAGGTTTT
GGTTTCATGCTTCTAGGTGGCAAGTTTTAAATAGCTCCCATGATATTCCCTGACAGCTGA
GACCTAGTATTAAGTGGAGAGGATTATAACCCTGGGCATTCCAGCTCTCAATCCACCTCG
CCAGTGGCTTTCAATCTTGTTTTTTGTTTTTGTTTTCATTTTTGTTTTTTACTGTGACTT
GTAAAAAATACATTTTATAggagttttcttgtggagcagtgggctagagatctggtgttg
tcactgcaacagcttaggctgctgctgtggcttgggttcgatccctggcctgggagcttc
cacatgAGGCCAAAAAAAAATTTTTTTTTTAACATTGCAAGCCACTACGCATGAGAATAT
TTACTTAAAAAAATTATTTTAGAATATTTCATGAAACATTACTTACCCTAACTACATGTG
ATGTAGTCTATTTCCTGTTTAACTAATTCTCTTCTCTTTC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               45-267, gnl|bosTau2|chr11 (44607286-44607517)
               

               
               45-267, gnl|Hg17|chr2 (70256741-70256509)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               45-267, gnl|bosTau2|chr11 (44607286-44607517)
               

               
               45-267, gnl|Hg17|chr2 (70256741-70256509)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cut (0.169924)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)

	45-267, gnl\|bosTau2\|chr11 (44607286-44607517)
	45-267, gnl\|Hg17\|chr2 (70256741-70256509)