Non-Coding RNA Search

rcut20_b1.y1

Sequence:


               
               TGAACAAAACAGTTTAGAAAGATTACGGTATGTTTGTATTATTTACAGTAACTTAATTTT
TAAAAACACAATTATCTAATAATAGGAGACTGGTTCAATAAGACATGGAGCATCATACAA
AGGAAATGCTGAATAGCCATTAAAGATGGTGCTATAGAAGAAAGAATATTAAATGACAGG
AGAAACTATTCTCAATATGTGAAGGGACAACATGCAAATTATAGAATAGTTATTTGGGTC
TGACAAAGGACAGAGAAAGGACCAGAGAGTAACCCCACTCTATTCCAAGCCAAGGTAGAA
ATCAGAAAAAGGAGAGTCAGGTAATAATGATTAAAATAGCAGTTTCCATTGTGACTCAGT
GGGTTAATGACCTGGTGTGGTATCCATGAGGATGCAGGTTTGATCTCCAGCCTCGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAACAAAACAGTTTAGAAAGATTACGGTATGTTTGTATTATTTACAGTAACTTAATTTT
TAAAAACACAATTATCTAATAATAGGAGACTGGTTCAATAAGACATGGAGCATCATACAA
AGGAAATGCTGAATAGCCATTAAAGATGGTGCTATAGAAGAAAGAATATTAAATGACAGG
AGAAACTATTCTCAATATGTGAAGGGACAACATGCAAATTATAGAATAGTTATTTGGGTC
TGACAAAGGACAGAGAAAGGACCAGAGAGTAACCCCACTCTATTCCAAGCCAAGGTAGAA
ATCAGAAAAAGGAGAGTCAGGTAATAATGATTAAAATAGCAGTTTCCATTGTGACTCAGT
GGGTTAATGACCTGGTGTGGTATCCATGAGGATGCAGGTTTGATCTCCAGCCTCGCTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-347, gnl|bosTau2|chr7 (52931038-52930691)
               

               
               1-347, gnl|Hg17|chr5 (166605127-166605474)
               

               
               1-347, gnl|Mm7|chr11 (36842353-36841997)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-347, gnl|bosTau2|chr7 (52931038-52930691)
               

               
               1-347, gnl|Hg17|chr5 (166605127-166605474)
               

               
               1-347, gnl|Mm7|chr11 (36842353-36841997)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cut (0.169924)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)

	1-347, gnl\|bosTau2\|chr7 (52931038-52930691)
	1-347, gnl\|Hg17\|chr5 (166605127-166605474)
	1-347, gnl\|Mm7\|chr11 (36842353-36841997)