Non-Coding RNA Search

rcut23_h19.y1

Sequence:


               
               TGTATGCCCATCGTGAGCCGAGGCAGCGTGATCGGCGTGGTGCAGATGGTGAACAAGATC
GGCGGCAGCGCCTTCTCCAAGACGGATGAGAACAACTTCAAAATGTTTGCCGTCTTCTGC
GCTCTGGCCTTACACTGTGCCAATATGTATCATAGAATCCGCCACTCCGAGTGCATTTAC
CGGGTCACCATGGAGAAGCTGTCCTACCACAGCATTTGTACCGCGGAAGAGTGGCAAGGC
CTCATGCGCTTCAACCTTCCCGTCCGTCTTTGCAAGGAGATTGAATTGTAAGCGTTTGGT
CTTAGCAGTTTCTTCAGGAAGAGATTTTAACTTTGATTGAATTTAAAATGAAATGGCTTA
CAGAATTGGAAACATAAATATCATATAACGTGTGGTTTCTTGTGTTGCCGTTTTCTTCCC
CTTCTAAGGAAGGAAGGGCCAGGTCTTTTTATCTTAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTATGCCCATCGTGAGCCGAGGCAGCGTGATCGGCGTGGTGCAGATGGTGAACAAGATC
GGCGGCAGCGCCTTCTCCAAGACGGATGAGAACAACTTCAAAATGTTTGCCGTCTTCTGC
GCTCTGGCCTTACACTGTGCCAATATGTATCATAGAATCCGCCACTCCGAGTGCATTTAC
CGGGTCACCATGGAGAAGCTGTCCTACCACAGCATTTGTACCGCGGAAGAGTGGCAAGGC
CTCATGCGCTTCAACCTTCCCGTCCGTCTTTGCAAGGAGATTGAATTGTAAGCGTTTGGT
CTTAGCAGTTTCTTCAGGAAGAGATTTTAACTTTGATTGAATTTAAAATGAAATGGCTTA
CAGAATTGGAAACATAAATATCATATAACGTGTGGTTTCTTGTGTTGCCGTTTTCTTCCC
CTTCTAAGGAAGGAAGGGCCAGGTCTTTTTATCTTAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               1-143, gnl|bosTau2|chr9 (62806311-62806453)
               

               
               1-143, gnl|Hg17|chr6 (165797543-165797401)
               

               
               1-143, gnl|Mm7|chr17 (7668635-7668777)
               


               
               145-463, gnl|bosTau2|chr9 (62822009-62822324)
               

               
               145-463, gnl|Hg17|chr6 (165780359-165780010)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-143, gnl|bosTau2|chr9 (62806311-62806453)
               

               
               1-143, gnl|Hg17|chr6 (165797543-165797401)
               

               
               1-143, gnl|Mm7|chr17 (7668635-7668777)
               


               
               145-463, gnl|bosTau2|chr9 (62822009-62822324)
               

               
               145-463, gnl|Hg17|chr6 (165780359-165780010)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cut (0.169924)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)

	1-143, gnl\|bosTau2\|chr9 (62806311-62806453)
	1-143, gnl\|Hg17\|chr6 (165797543-165797401)
	1-143, gnl\|Mm7\|chr17 (7668635-7668777)

	145-463, gnl\|bosTau2\|chr9 (62822009-62822324)
	145-463, gnl\|Hg17\|chr6 (165780359-165780010)