Non-Coding RNA Search

rcut34_b15.y1

Sequence:


               
               CCGGGACCTCATCAGCCATGATGAGATGTTTTCCGACATCTACAAGATCCGGGAGATCGC
GGACGGGCTGTGTCTGGAGGTGGAGGGGAAGATGGTCAGTAGGACAGAGGGTAACATTGA
TGACTCGCTCATTGGTGGAAATGCCTCCGCTGAAGGGCCCGAGGGCGAAGGTACCGAAAG
CACAGTAATCACTGGTGTCGATATTGTCATGAACCATCACCTGCAGGAAACCAGCTTCAC
AAAGGAAGCCTACAAGAAGTACATCAAAGATTATATGAAGTCAATCAAAGGGAAACTCGA
AGAACAGAGACCAGAAAGAGTAAAACCTTTTATGACAGGAGCTGCAGAACAAATCAAGCA
CATCCTTGCTAATTTCAAAAACTATCAGTTCTTTATTGGTGAAAACATGAATCCAGACGG
CATGGTTGCTCTGCTGGACTACCGTGAGGATGGTGTGACTCCATATATGATTTTCTTTAA
GGATGGCTTAGAAATGGAAAAATGTTAACAAATTTGGCTGTTGGGATCGGATCTATCACC
CGTCGTCATAACTGGCTGGCCACTGCTTTCCATCCACAAAACACCAGGACTTAGACAAGT
GGGACTGATGGCATCTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGGGACCTCATCAGCCATGATGAGATGTTTTCCGACATCTACAAGATCCGGGAGATCGC
GGACGGGCTGTGTCTGGAGGTGGAGGGGAAGATGGTCAGTAGGACAGAGGGTAACATTGA
TGACTCGCTCATTGGTGGAAATGCCTCCGCTGAAGGGCCCGAGGGCGAAGGTACCGAAAG
CACAGTAATCACTGGTGTCGATATTGTCATGAACCATCACCTGCAGGAAACCAGCTTCAC
AAAGGAAGCCTACAAGAAGTACATCAAAGATTATATGAAGTCAATCAAAGGGAAACTCGA
AGAACAGAGACCAGAAAGAGTAAAACCTTTTATGACAGGAGCTGCAGAACAAATCAAGCA
CATCCTTGCTAATTTCAAAAACTATCAGTTCTTTATTGGTGAAAACATGAATCCAGACGG
CATGGTTGCTCTGCTGGACTACCGTGAGGATGGTGTGACTCCATATATGATTTTCTTTAA
GGATGGCTTAGAAATGGAAAAATGTTAACAAATTTGGCTGTTGGGATCGGATCTATCACC
CGTCGTCATAACTGGCTGGCCACTGCTTTCCATCCACAAAACACCAGGACTTAGACAAGT
GGGACTGATGGCATCTTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|18490879|gb|AAH22436.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|18490879|gb|AAH22436.1|

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               1-618, gnl|bosTau2|chr14 (36158305-36157720)
               

               
               1-618, gnl|Hg17|chr6 (144563784-144563171)
               

               
               1-618, gnl|Mm7|chr6 (99966397-99965797)
               


               
               184-575, gnl|bosTau2|chr10 (45753393-45753003)
               

               
               184-575, gnl|Mm7|chr6 (99966214-99965841)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-618, gnl|bosTau2|chr14 (36158305-36157720)
               

               
               1-618, gnl|Hg17|chr6 (144563784-144563171)
               

               
               1-618, gnl|Mm7|chr6 (99966397-99965797)
               


               
               184-575, gnl|bosTau2|chr10 (45753393-45753003)
               

               
               184-575, gnl|Mm7|chr6 (99966214-99965841)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cut (0.169924)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)

	1-618, gnl\|bosTau2\|chr14 (36158305-36157720)
	1-618, gnl\|Hg17\|chr6 (144563784-144563171)
	1-618, gnl\|Mm7\|chr6 (99966397-99965797)

	184-575, gnl\|bosTau2\|chr10 (45753393-45753003)
	184-575, gnl\|Mm7\|chr6 (99966214-99965841)