Non-Coding RNA Search

rdbla0110_m23.y1

Sequence:


               
               AGCAGAGTTATCCTTTTAAAGCAGAGATCATATCCTGTCTGTCTCAAAACCCCCATGGCT
GGAACAAAATCGAAATTCCTTTCTCTACAAGGCGCTTCGTGGTCTGGCATCTGGCTACCT
GGGCTGTCTTATCTCCTATCATTTCCCTCTCACTTACTGACCTTCTTACTGAAGCATCCC
CAGCTTATTCCCACCTCAGGGCATAAACCTTAGCTCTTCTCTGTCCCAGAATGCTCTTTC
CCCATAGCTCCACGTGGCTGACTTATTCCTATGGTTCAAGACTTACCTATCAACTCCTTA
CCTGCCAACTCCTCGGAGAGGCCTTCCTTGAATATTTCACCTAAGTTGTGCCTGACCCTC
CCCTGTTTCTCTTCATCACATTACCTATTTTATTCTTAGATAAAAGATCACTAGCTAAAT
TTTCCTACTTATTTATTTACCTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCAGAGTTATCCTTTTAAAGCAGAGATCATATCCTGTCTGTCTCAAAACCCCCATGGCT
GGAACAAAATCGAAATTCCTTTCTCTACAAGGCGCTTCGTGGTCTGGCATCTGGCTACCT
GGGCTGTCTTATCTCCTATCATTTCCCTCTCACTTACTGACCTTCTTACTGAAGCATCCC
CAGCTTATTCCCACCTCAGGGCATAAACCTTAGCTCTTCTCTGTCCCAGAATGCTCTTTC
CCCATAGCTCCACGTGGCTGACTTATTCCTATGGTTCAAGACTTACCTATCAACTCCTTA
CCTGCCAACTCCTCGGAGAGGCCTTCCTTGAATATTTCACCTAAGTTGTGCCTGACCCTC
CCCTGTTTCTCTTCATCACATTACCTATTTTATTCTTAGATAAAAGATCACTAGCTAAAT
TTTCCTACTTATTTATTTACCTTTT

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               59-298, gnl|bosTau2|chr24 (25187736-25187499)
               

               
               59-298, gnl|canFam2|chr7 (69739365-69738901)
               

               
               59-298, gnl|dasNov1|scaffold_1968 (89115-89497)
               

               
               59-298, gnl|echTel1|scaffold_314305 (44494-44874)
               

               
               59-298, gnl|hg17|chr18 (17139424-17139850)
               

               
               59-298, gnl|Hg17|chr18 (17139671-17139909)
               

               
               59-298, gnl|mm7|chr18 (10597786-10598193)
               

               
               59-298, gnl|oryCun1|scaffold_193175 (39268-39694)
               

               
               59-298, gnl|panTro1|chr17 (13039413-13039842)
               

               
               59-298, gnl|rheMac2|chr18 (14296985-14297410)
               

               
               59-298, gnl|rn3|chr18 (1722074-1722488)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               59-298, gnl|bosTau2|chr24 (25187736-25187499)
               

               
               59-298, gnl|canFam2|chr7 (69739365-69738901)
               

               
               59-298, gnl|dasNov1|scaffold_1968 (89115-89497)
               

               
               59-298, gnl|echTel1|scaffold_314305 (44494-44874)
               

               
               59-298, gnl|hg17|chr18 (17139424-17139850)
               

               
               59-298, gnl|Hg17|chr18 (17139671-17139909)
               

               
               59-298, gnl|mm7|chr18 (10597786-10598193)
               

               
               59-298, gnl|oryCun1|scaffold_193175 (39268-39694)
               

               
               59-298, gnl|panTro1|chr17 (13039413-13039842)
               

               
               59-298, gnl|rheMac2|chr18 (14296985-14297410)
               

               
               59-298, gnl|rn3|chr18 (1722074-1722488)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

Help | Less info


               
               bla (0.124347)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)

	59-298, gnl\|bosTau2\|chr24 (25187736-25187499)
	59-298, gnl\|canFam2\|chr7 (69739365-69738901)
	59-298, gnl\|dasNov1\|scaffold_1968 (89115-89497)
	59-298, gnl\|echTel1\|scaffold_314305 (44494-44874)
	59-298, gnl\|hg17\|chr18 (17139424-17139850)
	59-298, gnl\|Hg17\|chr18 (17139671-17139909)
	59-298, gnl\|mm7\|chr18 (10597786-10598193)
	59-298, gnl\|oryCun1\|scaffold_193175 (39268-39694)
	59-298, gnl\|panTro1\|chr17 (13039413-13039842)
	59-298, gnl\|rheMac2\|chr18 (14296985-14297410)
	59-298, gnl\|rn3\|chr18 (1722074-1722488)