Non-Coding RNA Search

rdbla0115_k5.y1

Sequence:


               
               TCTTTATGGATGTTTTCTTGTAATTACAGCCAGGCATTGGGCGTCGTCCTTGCACAGGCA
GTGAGTAGCTGGCCTTGGAGATTTCGCAGGGAGCCCTGAGCTGTCGGCAGCTGGCAGTCC
TGAATGTCCTTGGGAACAGTGGTCTAAGCTGAGCCGTTGAACTTTGAGGACTCTCTGAAC
TTCTTTGAAAACTCAGTTTCTACATATGAAAAGGCGTGGTGTGGAAAATGCTTATAGAGT
TATATTCCATGAGTGTATATTAATGTATGAAAATATATGAATGTTAATCCATAATTTATG
AATGCTTAGCCATCTACCATAGGCTCTGTGGATAGCAAATATACAATAAAAGGTAAAACT
TATTTTTTAACCATGTGCAATTGAAAAAGCACAATCTCTACCATCTCACAATCACAGCTA
CTAAACATTGAGTGCCTGCTCTAATTGAGGTACTGCATTTATTACTGCTATTCTTCACAA
TAATCCTTCAAAAGAGTTATTACTATCCTCATTTTATAGTGAAGAAACTGAGGCTCAAAG
AGTTCTTGCCAAAGTCAAACTAGCTTGGAAGAGGCTAAGCCTGGATTTCAAGTCCTTTTC
CCTCACATTCAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTTATGGATGTTTTCTTGTAATTACAGCCAGGCATTGGGCGTCGTCCTTGCACAGGCA
GTGAGTAGCTGGCCTTGGAGATTTCGCAGGGAGCCCTGAGCTGTCGGCAGCTGGCAGTCC
TGAATGTCCTTGGGAACAGTGGTCTAAGCTGAGCCGTTGAACTTTGAGGACTCTCTGAAC
TTCTTTGAAAACTCAGTTTCTACATATGAAAAGGCGTGGTGTGGAAAATGCTTATAGAGT
TATATTCCATGAGTGTATATTAATGTATGAAAATATATGAATGTTAATCCATAATTTATG
AATGCTTAGCCATCTACCATAGGCTCTGTGGATAGCAAATATACAATAAAAGGTAAAACT
TATTTTTTAACCATGTGCAATTGAAAAAGCACAATCTCTACCATCTCACAATCACAGCTA
CTAAACATTGAGTGCCTGCTCTAATTGAGGTACTGCATTTATTACTGCTATTCTTCACAA
TAATCCTTCAAAAGAGTTATTACTATCCTCATTTTATAGTGAAGAAACTGAGGCTCAAAG
AGTTCTTGCCAAAGTCAAACTAGCTTGGAAGAGGCTAAGCCTGGATTTCAAGTCCTTTTC
CCTCACATTCAAT

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               2-277, gnl|bosTau2|chr18 (27345844-27346128)
               

               
               2-277, gnl|Hg17|chr16 (63650720-63650430)
               

               
               2-277, gnl|Mm7|chr8 (101320302-101320031)
               


               
               293-613, gnl|bosTau2|chr18 (27346559-27346875)
               

               
               293-613, gnl|Hg17|chr16 (63650409-63650111)
               

               
               293-613, gnl|Mm7|chr8 (101319991-101319721)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-277, gnl|bosTau2|chr18 (27345844-27346128)
               

               
               2-277, gnl|Hg17|chr16 (63650720-63650430)
               

               
               2-277, gnl|Mm7|chr8 (101320302-101320031)
               


               
               293-613, gnl|bosTau2|chr18 (27346559-27346875)
               

               
               293-613, gnl|Hg17|chr16 (63650409-63650111)
               

               
               293-613, gnl|Mm7|chr8 (101319991-101319721)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               bla (0.124347)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)

	2-277, gnl\|bosTau2\|chr18 (27345844-27346128)
	2-277, gnl\|Hg17\|chr16 (63650720-63650430)
	2-277, gnl\|Mm7\|chr8 (101320302-101320031)

	293-613, gnl\|bosTau2\|chr18 (27346559-27346875)
	293-613, gnl\|Hg17\|chr16 (63650409-63650111)
	293-613, gnl\|Mm7\|chr8 (101319991-101319721)