Non-Coding RNA Search

rdbla0125_j18.y1

Sequence:


               
               GAACCTAATACAAAGTGAAAGACTAAAAAGGCAGTAGGAAAGTATTAATCTCATTCTGCT
TCAAAATTCATAGAATTGAAATTACAGTAATTATTTTTCAGTAAAGTTTTGAACATTTTT
TTAATGTTTTATTATAACATTGAATTGATAGAAGTTTTTTGGGATTTACATTAAACAAGA
ACCCTGTAAAGAACTTGGAAGTAATTTGGATATTTAATTTTATTTTTATATTGTTTATTT
TCTTACCACTTCCTTCAAAACTCTGGGATGGATCCCATTTTGCCCTGGAATTGTTCCCAC
ACTGGCAGTGGATTTGCCTAGCACACTGCATCATGTGGAACAGGCAAGGCTCCTAGGATT
TGTGCTCCTGCCTTTCTGAATTTTCAGTTATTGAGAGTGAGAGAACCATATATTTCACAT
GGCCATAAGTGAGATACAAATAAATACAATTTCCTTGTAGTTCTTAAAATTACTTTTGTC
CTCAGACTTACTATGCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACCTAATACAAAGTGAAAGACTAAAAAGGCAGTAGGAAAGTATTAATCTCATTCTGCT
TCAAAATTCATAGAATTGAAATTACAGTAATTATTTTTCAGTAAAGTTTTGAACATTTTT
TTAATGTTTTATTATAACATTGAATTGATAGAAGTTTTTTGGGATTTACATTAAACAAGA
ACCCTGTAAAGAACTTGGAAGTAATTTGGATATTTAATTTTATTTTTATATTGTTTATTT
TCTTACCACTTCCTTCAAAACTCTGGGATGGATCCCATTTTGCCCTGGAATTGTTCCCAC
ACTGGCAGTGGATTTGCCTAGCACACTGCATCATGTGGAACAGGCAAGGCTCCTAGGATT
TGTGCTCCTGCCTTTCTGAATTTTCAGTTATTGAGAGTGAGAGAACCATATATTTCACAT
GGCCATAAGTGAGATACAAATAAATACAATTTCCTTGTAGTTCTTAAAATTACTTTTGTC
CTCAGACTTACTATGCTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               174-370, - strand, RNAz p=0.886774

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               174-370, - strand, RNAz p=0.886774

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               116-498, gnl|bosTau2|chr2 (19956005-19955617)
               

               
               116-498, gnl|Hg17|chr2 (161901184-161901634)
               

               
               116-498, gnl|Mm7|chr2 (61569622-61569999)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               116-498, gnl|bosTau2|chr2 (19956005-19955617)
               

               
               116-498, gnl|Hg17|chr2 (161901184-161901634)
               

               
               116-498, gnl|Mm7|chr2 (61569622-61569999)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               bla (0.124347)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)

	116-498, gnl\|bosTau2\|chr2 (19956005-19955617)
	116-498, gnl\|Hg17\|chr2 (161901184-161901634)
	116-498, gnl\|Mm7\|chr2 (61569622-61569999)