Non-Coding RNA Search

rdbla0129_e19.y1

Sequence:


               
               CAGTACCTGTTTGAAAATGGTAGAATAGATAACATTTTTACTGAGCCCTATTCCAGATTT
ATGATTGAACTTACCAAACTCTTGAAAATATGGGAACCTACAATACTTCCTAATGGTTAC
ATGTTCTCTCGCATTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGTACCTGTTTGAAAATGGTAGAATAGATAACATTTTTACTGAGCCCTATTCCAGATTT
ATGATTGAACTTACCAAACTCTTGAAAATATGGGAACCTACAATACTTCCTAATGGTTAC
ATGTTCTCTCGCATTGA

Aligned organism(s): 19 entry(ies)

More info

Aligned organism(s): 19 entry(ies)

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               2-117, gnl|bosTau2|chr3 (77451083-77450968)
               

               
               2-117, gnl|canFam2|chr15 (9708078-9707945)
               

               
               2-117, gnl|danRer3|chr19 (56186062-56186199)
               

               
               2-117, gnl|dasNov1|scaffold_154764 (3648-3781)
               

               
               2-117, gnl|echTel1|scaffold_309481 (78033-78162)
               

               
               2-117, gnl|fr1|chrUn (212536067-212536196)
               

               
               2-117, gnl|galGal2|chr23 (3868852-3868723)
               

               
               2-117, gnl|hg17|chr1 (35548616-35548750)
               

               
               2-117, gnl|Hg17|chr1 (35548664-35548779)
               

               
               2-117, gnl|loxAfr1|scaffold_27484 (1900-2029)
               

               
               2-117, gnl|mm7|chr4 (126314989-126314859)
               

               
               2-117, gnl|Mm7|chr4 (126314943-126314828)
               

               
               2-117, gnl|monDom2|scaffold_43 (15076112-15075979)
               

               
               2-117, gnl|oryCun1|scaffold_174212 (44432-44298)
               

               
               2-117, gnl|panTro1|chr1_random (61530817-61530685)
               

               
               2-117, gnl|rheMac2|chr1 (38223280-38223412)
               

               
               2-117, gnl|rn3|chr5 (146284210-146284080)
               

               
               2-117, gnl|tetNig1|chrUn_random (3494986-3494884)
               

               
               2-117, gnl|xenTro1|scaffold_977 (349803-349932)

Aligned organism(s): 19 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-117, gnl|bosTau2|chr3 (77451083-77450968)
               

               
               2-117, gnl|canFam2|chr15 (9708078-9707945)
               

               
               2-117, gnl|danRer3|chr19 (56186062-56186199)
               

               
               2-117, gnl|dasNov1|scaffold_154764 (3648-3781)
               

               
               2-117, gnl|echTel1|scaffold_309481 (78033-78162)
               

               
               2-117, gnl|fr1|chrUn (212536067-212536196)
               

               
               2-117, gnl|galGal2|chr23 (3868852-3868723)
               

               
               2-117, gnl|hg17|chr1 (35548616-35548750)
               

               
               2-117, gnl|Hg17|chr1 (35548664-35548779)
               

               
               2-117, gnl|loxAfr1|scaffold_27484 (1900-2029)
               

               
               2-117, gnl|mm7|chr4 (126314989-126314859)
               

               
               2-117, gnl|Mm7|chr4 (126314943-126314828)
               

               
               2-117, gnl|monDom2|scaffold_43 (15076112-15075979)
               

               
               2-117, gnl|oryCun1|scaffold_174212 (44432-44298)
               

               
               2-117, gnl|panTro1|chr1_random (61530817-61530685)
               

               
               2-117, gnl|rheMac2|chr1 (38223280-38223412)
               

               
               2-117, gnl|rn3|chr5 (146284210-146284080)
               

               
               2-117, gnl|tetNig1|chrUn_random (3494986-3494884)
               

               
               2-117, gnl|xenTro1|scaffold_977 (349803-349932)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               bla (0.124347)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)

	2-117, gnl\|bosTau2\|chr3 (77451083-77450968)
	2-117, gnl\|canFam2\|chr15 (9708078-9707945)
	2-117, gnl\|danRer3\|chr19 (56186062-56186199)
	2-117, gnl\|dasNov1\|scaffold_154764 (3648-3781)
	2-117, gnl\|echTel1\|scaffold_309481 (78033-78162)
	2-117, gnl\|fr1\|chrUn (212536067-212536196)
	2-117, gnl\|galGal2\|chr23 (3868852-3868723)
	2-117, gnl\|hg17\|chr1 (35548616-35548750)
	2-117, gnl\|Hg17\|chr1 (35548664-35548779)
	2-117, gnl\|loxAfr1\|scaffold_27484 (1900-2029)
	2-117, gnl\|mm7\|chr4 (126314989-126314859)
	2-117, gnl\|Mm7\|chr4 (126314943-126314828)
	2-117, gnl\|monDom2\|scaffold_43 (15076112-15075979)
	2-117, gnl\|oryCun1\|scaffold_174212 (44432-44298)
	2-117, gnl\|panTro1\|chr1_random (61530817-61530685)
	2-117, gnl\|rheMac2\|chr1 (38223280-38223412)
	2-117, gnl\|rn3\|chr5 (146284210-146284080)
	2-117, gnl\|tetNig1\|chrUn_random (3494986-3494884)
	2-117, gnl\|xenTro1\|scaffold_977 (349803-349932)