Non-Coding RNA Search

rdbla0135_e12.y1

Sequence:


               
               GGATGAAGAAGCCTGAGGTTCCTGAGATACATCAGCACCATTCAGATTGCATGTGATCAC
ATGAGCACAGACAGCCTGGCTACTGACTCCAGCCCTACAAAAAAGCCCTGGTCAGTCTGT
CTTGATGACAGGTTTGGCTTAGCTCATCAAATCCATAGCAAGCAGTGCCGCCTCTATTCT
TTAGGGCTGGGAAGTGATGATACCCGTTTTGAGGTTGGCATGGCCAATGATGGATGTGAA
GTGCATCGTTTTGATCCTAGTGTTAAATCAGCTCACGTTCTGGAAAACGAGCGTCTTTGG
TATCACCGCTTGTCCATCAACTGGCGGGACCCCCACCCAGCTGTTGCTGCCCAAAAACCG
TACAGCAGCACCAGAAAACTGAGGACCATTTTGAATGAATTTGGACATCACAAGTGGCAG
ACAATTGGCAGAAGTATGGAGATTTAAGAAACACTGATGAGCCTTGTCATGTGGGAAATT
ACCTTGATGCAATGTAGCCTCCAAATATACTATAGGTCATTCTCCCAAAGCAACAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGATGAAGAAGCCTGAGGTTCCTGAGATACATCAGCACCATTCAGATTGCATGTGATCAC
ATGAGCACAGACAGCCTGGCTACTGACTCCAGCCCTACAAAAAAGCCCTGGTCAGTCTGT
CTTGATGACAGGTTTGGCTTAGCTCATCAAATCCATAGCAAGCAGTGCCGCCTCTATTCT
TTAGGGCTGGGAAGTGATGATACCCGTTTTGAGGTTGGCATGGCCAATGATGGATGTGAA
GTGCATCGTTTTGATCCTAGTGTTAAATCAGCTCACGTTCTGGAAAACGAGCGTCTTTGG
TATCACCGCTTGTCCATCAACTGGCGGGACCCCCACCCAGCTGTTGCTGCCCAAAAACCG
TACAGCAGCACCAGAAAACTGAGGACCATTTTGAATGAATTTGGACATCACAAGTGGCAG
ACAATTGGCAGAAGTATGGAGATTTAAGAAACACTGATGAGCCTTGTCATGTGGGAAATT
ACCTTGATGCAATGTAGCCTCCAAATATACTATAGGTCATTCTCCCAAAGCAACAGAA

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               38-186, gnl|bosTau2|chr9 (22729092-22729240)
               

               
               38-186, gnl|canFam2|chr12 (70050958-70051254)
               

               
               38-186, gnl|dasNov1|scaffold_44360 (3266-3554)
               

               
               38-186, gnl|galGal2|chr3 (64995663-64995362)
               

               
               38-186, gnl|hg17|chr6 (110743093-110743394)
               

               
               38-186, gnl|Hg17|chr6 (110743385-110743237)
               

               
               38-186, gnl|loxAfr1|scaffold_17422 (29857-29562)
               

               
               38-186, gnl|mm7|chr10 (40525459-40525164)
               

               
               38-186, gnl|Mm7|chr10 (40525171-40525319)
               

               
               38-186, gnl|monDom2|scaffold_0 (109692929-109692640)
               

               
               38-186, gnl|oryCun1|scaffold_207189 (69746-69460)
               

               
               38-186, gnl|panTro1|chr5 (113085093-113085394)
               

               
               38-186, gnl|rheMac2|chr4 (153647113-153646812)
               

               
               38-186, gnl|rn3|chr20 (44892048-44891767)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               38-186, gnl|bosTau2|chr9 (22729092-22729240)
               

               
               38-186, gnl|canFam2|chr12 (70050958-70051254)
               

               
               38-186, gnl|dasNov1|scaffold_44360 (3266-3554)
               

               
               38-186, gnl|galGal2|chr3 (64995663-64995362)
               

               
               38-186, gnl|hg17|chr6 (110743093-110743394)
               

               
               38-186, gnl|Hg17|chr6 (110743385-110743237)
               

               
               38-186, gnl|loxAfr1|scaffold_17422 (29857-29562)
               

               
               38-186, gnl|mm7|chr10 (40525459-40525164)
               

               
               38-186, gnl|Mm7|chr10 (40525171-40525319)
               

               
               38-186, gnl|monDom2|scaffold_0 (109692929-109692640)
               

               
               38-186, gnl|oryCun1|scaffold_207189 (69746-69460)
               

               
               38-186, gnl|panTro1|chr5 (113085093-113085394)
               

               
               38-186, gnl|rheMac2|chr4 (153647113-153646812)
               

               
               38-186, gnl|rn3|chr20 (44892048-44891767)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               bla (0.124347)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)

	38-186, gnl\|bosTau2\|chr9 (22729092-22729240)
	38-186, gnl\|canFam2\|chr12 (70050958-70051254)
	38-186, gnl\|dasNov1\|scaffold_44360 (3266-3554)
	38-186, gnl\|galGal2\|chr3 (64995663-64995362)
	38-186, gnl\|hg17\|chr6 (110743093-110743394)
	38-186, gnl\|Hg17\|chr6 (110743385-110743237)
	38-186, gnl\|loxAfr1\|scaffold_17422 (29857-29562)
	38-186, gnl\|mm7\|chr10 (40525459-40525164)
	38-186, gnl\|Mm7\|chr10 (40525171-40525319)
	38-186, gnl\|monDom2\|scaffold_0 (109692929-109692640)
	38-186, gnl\|oryCun1\|scaffold_207189 (69746-69460)
	38-186, gnl\|panTro1\|chr5 (113085093-113085394)
	38-186, gnl\|rheMac2\|chr4 (153647113-153646812)
	38-186, gnl\|rn3\|chr20 (44892048-44891767)