rduo401b_j8.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTTTTTTTTTTTTTTTGTTTGTTTTTTTTTTTAAATACAGAAAAGAGTTGGAATTTTG AACAAAAAATTAAATTAAGGCATTCAAAATGGGTAACGTTGCCTATTATGAAGCTTTAGG AAACTGACAGAATTAACTTTAAACTGTGTGTTACAGTAATTGCTTAAACATAAACATGCA GCTTCCATCAGGTACACGCAAATGAGTGATATGAGCTCCAACATTATGGCTTTATACAAG TGCATAGTTGCAACTGCAGTAAGTAATGATATTGGATTAATGTTTATAAAAAAATAAAGT GGGAAGTTAAAAAAAACCCTCTTGCAGTATTACAGTACTATATATATGTGTGTGTGTGCA TGAATGCATGCGGATACACACACACACACACACACAATGGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTTTTTTTTTTTTTTTGTTTGTTTTTTTTTTTAAATACAGAAAAGAGTTGGAATTTTG AACAAAAAATTAAATTAAGGCATTCAAAATGGGTAACGTTGCCTATTATGAAGCTTTAGG AAACTGACAGAATTAACTTTAAACTGTGTGTTACAGTAATTGCTTAAACATAAACATGCA GCTTCCATCAGGTACACGCAAATGAGTGATATGAGCTCCAACATTATGGCTTTATACAAG TGCATAGTTGCAACTGCAGTAAGTAATGATATTGGATTAATGTTTATAAAAAAATAAAGT GGGAAGTTAAAAAAAACCCTCTTGCAGTATTACAGTACTATATATATGTGTGTGTGTGCA TGAATGCATGCGGATACACACACACACACACACACAATGGTC |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 20-136, - strand, RNAz p=0.543825 | |
| 293-402, - strand, RNAz p=1 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 20-136, - strand, RNAz p=0.543825 | |
| 293-402, - strand, RNAz p=1 |
| Predicted microRNA(s): 2 entry(ies) | More info |
| Predicted microRNA(s): 2 entry(ies) | Help | Less info |
| 356-407, + strand, RNAmicro p=0.98397 | |
| 340-429, - strand, RNAmicro p=0.976302 |
| Predicted microRNA(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 356-407, + strand, RNAmicro p=0.98397 | |
| 340-429, - strand, RNAmicro p=0.976302 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of NM_004850, - |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 20-402, gnl|bosTau2|chr11 (65386374-65385998) | |
| 20-402, gnl|Hg17|chr2 (11273367-11273733) | |
| 20-402, gnl|Mm7|chr12 (17040026-17039628) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 20-402, gnl|bosTau2|chr11 (65386374-65385998) | |
| 20-402, gnl|Hg17|chr2 (11273367-11273733) | |
| 20-402, gnl|Mm7|chr12 (17040026-17039628) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| duo (0.172801) |