rduo411b_e7.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAAGTAAAGAGAACAAAAGTCCAGCCATTAAATATAGACCAGAAAACACTCTAGAACCA GCCAGTACAAGTGTCAGCCATCATGGAGCAGAGCACACTTCAGCAGCACTGTCCTCGTCC ACCAAGAGCACGTCTGTTAATTTCAGCAACCTTTCCATGACGCCATTTGGAGGATCCTCA GGGGTGACACCTTTTGGAGGAGCATCTTCCTCATTTTCAGTGGTGCCAAGTTCATATCCT GCTGGTTTAACAGGTGGTGTTACTATATTTGTGGCCTTATATGATTATGAAGCTAGAACT ACAGAAGACCTTTCATTTAAGAAGGGTGAAAGATTTCAAATAATTAACAATACGGAAGGA GACTGGTGGGAAGCAAGATCAATCGCTACAGGAAAGAGTGGCTATATCCCTAGCAATTAT GTAGCCCCTGCAGATTCCATTCAGGCAGAAGAATGGTATTTTGGCAAAATGGGGAGAAAA GATGCTGAGAGATTACTTCTGAATCCTGGGAATCAAAGAGGTATTTTCTTAGTAAGAGAG AGTGAAACTACTAAAGGTGCTTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAAGTAAAGAGAACAAAAGTCCAGCCATTAAATATAGACCAGAAAACACTCTAGAACCA GCCAGTACAAGTGTCAGCCATCATGGAGCAGAGCACACTTCAGCAGCACTGTCCTCGTCC ACCAAGAGCACGTCTGTTAATTTCAGCAACCTTTCCATGACGCCATTTGGAGGATCCTCA GGGGTGACACCTTTTGGAGGAGCATCTTCCTCATTTTCAGTGGTGCCAAGTTCATATCCT GCTGGTTTAACAGGTGGTGTTACTATATTTGTGGCCTTATATGATTATGAAGCTAGAACT ACAGAAGACCTTTCATTTAAGAAGGGTGAAAGATTTCAAATAATTAACAATACGGAAGGA GACTGGTGGGAAGCAAGATCAATCGCTACAGGAAAGAGTGGCTATATCCCTAGCAATTAT GTAGCCCCTGCAGATTCCATTCAGGCAGAAGAATGGTATTTTGGCAAAATGGGGAGAAAA GATGCTGAGAGATTACTTCTGAATCCTGGGAATCAAAGAGGTATTTTCTTAGTAAGAGAG AGTGAAACTACTAAAGGTGCTTA |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 1-256, gnl|bosTau2|chr24 (26043532-26043277) | |
| 1-256, gnl|canFam2|chr7 (70599697-70599430) | |
| 1-256, gnl|canFam2|chr7 (70599426-70599719) | |
| 1-256, gnl|danRer3|chr18 (19411865-19412166) | |
| 1-256, gnl|dasNov1|scaffold_14656 (25705-25409) | |
| 1-256, gnl|dasNov1|scaffold_51350 (602-342) | |
| 1-256, gnl|echTel1|scaffold_286363 (6967-7234) | |
| 1-256, gnl|echTel1|scaffold_286363 (7238-6951) | |
| 1-256, gnl|fr1|chrUn (3003284-3003006) | |
| 1-256, gnl|fr1|chrUn (179437192-179437495) | |
| 1-256, gnl|galGal2|chr2 (101125207-101125474) | |
| 1-256, gnl|galGal2|chr2 (101125478-101125184) | |
| 1-256, gnl|hg17|chr18 (746556-746853) | |
| 1-256, gnl|Hg17|chr18 (746815-746554) | |
| 1-256, gnl|hg17|chr22 (24367779-24368053) | |
| 1-256, gnl|loxAfr1|scaffold_34081 (3302-3566) | |
| 1-256, gnl|loxAfr1|scaffold_34081 (3570-3278) | |
| 1-256, gnl|mm7|chr5 (31672851-31673117) | |
| 1-256, gnl|mm7|chr5 (31673122-31672827) | |
| 1-256, gnl|Mm7|chr5 (31672867-31673122) | |
| 1-256, gnl|monDom2|scaffold_21 (34684636-34684341) | |
| 1-256, gnl|monDom2|scaffold_4 (85761538-85761275) | |
| 1-256, gnl|oryCun1|scaffold_122381 (7126-7383) | |
| 1-256, gnl|oryCun1|scaffold_129010 (10888-11182) | |
| 1-256, gnl|panTro1|chr17 (12053647-12053346) | |
| 1-256, gnl|panTro1|chr23 (24449527-24449801) | |
| 1-256, gnl|rheMac2|chr10 (69471998-69472265) | |
| 1-256, gnl|rheMac2|chr18 (13344672-13344371) | |
| 1-256, gnl|rn3|chr1 (37737888-37738109) | |
| 1-256, gnl|rn3|chr9 (112726589-112726294) | |
| 1-256, gnl|tetNig1|chr6 (4459642-4459355) | |
| 1-256, gnl|tetNig1|chr6 (4459341-4459649) | |
| 1-256, gnl|xenTro1|scaffold_460 (59969-59719) | |
| 1-256, gnl|xenTro1|scaffold_460 (59715-59994) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-256, gnl|bosTau2|chr24 (26043532-26043277) | |
| 1-256, gnl|canFam2|chr7 (70599697-70599430) | |
| 1-256, gnl|canFam2|chr7 (70599426-70599719) | |
| 1-256, gnl|danRer3|chr18 (19411865-19412166) | |
| 1-256, gnl|dasNov1|scaffold_14656 (25705-25409) | |
| 1-256, gnl|dasNov1|scaffold_51350 (602-342) | |
| 1-256, gnl|echTel1|scaffold_286363 (6967-7234) | |
| 1-256, gnl|echTel1|scaffold_286363 (7238-6951) | |
| 1-256, gnl|fr1|chrUn (3003284-3003006) | |
| 1-256, gnl|fr1|chrUn (179437192-179437495) | |
| 1-256, gnl|galGal2|chr2 (101125207-101125474) | |
| 1-256, gnl|galGal2|chr2 (101125478-101125184) | |
| 1-256, gnl|hg17|chr18 (746556-746853) | |
| 1-256, gnl|Hg17|chr18 (746815-746554) | |
| 1-256, gnl|hg17|chr22 (24367779-24368053) | |
| 1-256, gnl|loxAfr1|scaffold_34081 (3302-3566) | |
| 1-256, gnl|loxAfr1|scaffold_34081 (3570-3278) | |
| 1-256, gnl|mm7|chr5 (31672851-31673117) | |
| 1-256, gnl|mm7|chr5 (31673122-31672827) | |
| 1-256, gnl|Mm7|chr5 (31672867-31673122) | |
| 1-256, gnl|monDom2|scaffold_21 (34684636-34684341) | |
| 1-256, gnl|monDom2|scaffold_4 (85761538-85761275) | |
| 1-256, gnl|oryCun1|scaffold_122381 (7126-7383) | |
| 1-256, gnl|oryCun1|scaffold_129010 (10888-11182) | |
| 1-256, gnl|panTro1|chr17 (12053647-12053346) | |
| 1-256, gnl|panTro1|chr23 (24449527-24449801) | |
| 1-256, gnl|rheMac2|chr10 (69471998-69472265) | |
| 1-256, gnl|rheMac2|chr18 (13344672-13344371) | |
| 1-256, gnl|rn3|chr1 (37737888-37738109) | |
| 1-256, gnl|rn3|chr9 (112726589-112726294) | |
| 1-256, gnl|tetNig1|chr6 (4459642-4459355) | |
| 1-256, gnl|tetNig1|chr6 (4459341-4459649) | |
| 1-256, gnl|xenTro1|scaffold_460 (59969-59719) | |
| 1-256, gnl|xenTro1|scaffold_460 (59715-59994) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| duo (0.172801) |