Non-Coding RNA Search

rduo422b_f7.y1

Sequence:


               
               GACGAAGCGAGGGACCCCTGGAAAGCCCGCAGCGGAGGAAGTTAAATTTGGTCACGAAGT
GCCCCTGACAGGTCCCGGCAGGTCCCCTCGGGAAGTATGACAGGACCTTGGGGAACAGCC
GGGGCCCCTGGGCCACACCCGGTCAGCCGCCCTCCCCGGCTTGCTCTCTTTTCTGGGTTT
GAGACCCACTTCTGTCACCTGCTACCCAGTTCTGTCACCTGCTATCTGGGAAACAGTGAA
ACGTGTGGCTCCATGAAAGATTGCGAAACAGTTCTTTTACTTCAGGACAACTGTACAAAG
TGTTAAAGAAAATGCAACGCTGATTTGGCACAGCCTTCCTGTGTGTTCTGTCTCCCCCGT
TGGCTCACACATTCTTTCTCACTCTGAACGTTCCGTCTACGCCTGCGACTGAGACAGGAA
GCCAGACACACATGCTGAAATAATTTCAATAAATATCAACTCTAAACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACGAAGCGAGGGACCCCTGGAAAGCCCGCAGCGGAGGAAGTTAAATTTGGTCACGAAGT
GCCCCTGACAGGTCCCGGCAGGTCCCCTCGGGAAGTATGACAGGACCTTGGGGAACAGCC
GGGGCCCCTGGGCCACACCCGGTCAGCCGCCCTCCCCGGCTTGCTCTCTTTTCTGGGTTT
GAGACCCACTTCTGTCACCTGCTACCCAGTTCTGTCACCTGCTATCTGGGAAACAGTGAA
ACGTGTGGCTCCATGAAAGATTGCGAAACAGTTCTTTTACTTCAGGACAACTGTACAAAG
TGTTAAAGAAAATGCAACGCTGATTTGGCACAGCCTTCCTGTGTGTTCTGTCTCCCCCGT
TGGCTCACACATTCTTTCTCACTCTGAACGTTCCGTCTACGCCTGCGACTGAGACAGGAA
GCCAGACACACATGCTGAAATAATTTCAATAAATATCAACTCTAAACC

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

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               265-468, gnl|bosTau2|chr13 (39852155-39851952)
               

               
               265-468, gnl|hg17|chr20 (55636683-55636950)
               

               
               265-468, gnl|Hg17|chr20 (55636777-55636979)
               

               
               265-468, gnl|loxAfr1|scaffold_43858 (8350-8612)
               

               
               265-468, gnl|oryCun1|scaffold_145600 (5950-5721)
               

               
               265-468, gnl|panTro1|chr21 (58564468-58564735)
               

               
               265-468, gnl|rheMac2|chr10 (6890919-6890652)

Aligned organism(s): 7 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               265-468, gnl|bosTau2|chr13 (39852155-39851952)
               

               
               265-468, gnl|hg17|chr20 (55636683-55636950)
               

               
               265-468, gnl|Hg17|chr20 (55636777-55636979)
               

               
               265-468, gnl|loxAfr1|scaffold_43858 (8350-8612)
               

               
               265-468, gnl|oryCun1|scaffold_145600 (5950-5721)
               

               
               265-468, gnl|panTro1|chr21 (58564468-58564735)
               

               
               265-468, gnl|rheMac2|chr10 (6890919-6890652)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               duo (0.172801)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               duo (0.172801)

	265-468, gnl\|bosTau2\|chr13 (39852155-39851952)
	265-468, gnl\|hg17\|chr20 (55636683-55636950)
	265-468, gnl\|Hg17\|chr20 (55636777-55636979)
	265-468, gnl\|loxAfr1\|scaffold_43858 (8350-8612)
	265-468, gnl\|oryCun1\|scaffold_145600 (5950-5721)
	265-468, gnl\|panTro1\|chr21 (58564468-58564735)
	265-468, gnl\|rheMac2\|chr10 (6890919-6890652)