Non-Coding RNA Search

rebs02c_b4.y1

Sequence:


               
               AACCATGGCGCCATAAGGGGAACTCCCCAAAGGTTTTTAAATCCATAACCAAGTTGAAAA
AATCTGAGCTATTTTATATCATTAGGTAAGTTGGGTGGTTCCTTTTGGTAAACATAAGAT
ACTGTATATTAGAAATTTAAAATGGCTCTTGAGGAAATGTTTTTATGCCACTATATTAAC
TCACTTTTAGGAGTAATGTGATGGTAATTTTAAAGTAGTTTTTCTGTTTTTCTTCCCAGA
TCCAAGTATTTTAGAACATGCTCAAGAGGTGAGCACTTAACTATAGAGGTAAGTAGAATC
ATAAATCTGATGGGATAAAAGTATCTTCAGAAGGGCAGGAGGGACTTTTTTTTTTTAAGT
TAAGGGGAAAGGATCTGAACCTGAATTTAGCATCGACTGTTTATATTTTAACATTATCGA
TGCTAGTGAAGAGGGAAAGAATGGGAGTGGTGGGGGAGCGTGAATAGGGAGAACAAGTTT
GTGAAAGATTAAGGTCCTGTTCTCCAAGAGTTTCTACTTCTACTGAAGAGGTGGCGGGTG
ACATTTGAATACAATCTGTAGTCTAGTTTAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACCATGGCGCCATAAGGGGAACTCCCCAAAGGTTTTTAAATCCATAACCAAGTTGAAAA
AATCTGAGCTATTTTATATCATTAGGTAAGTTGGGTGGTTCCTTTTGGTAAACATAAGAT
ACTGTATATTAGAAATTTAAAATGGCTCTTGAGGAAATGTTTTTATGCCACTATATTAAC
TCACTTTTAGGAGTAATGTGATGGTAATTTTAAAGTAGTTTTTCTGTTTTTCTTCCCAGA
TCCAAGTATTTTAGAACATGCTCAAGAGGTGAGCACTTAACTATAGAGGTAAGTAGAATC
ATAAATCTGATGGGATAAAAGTATCTTCAGAAGGGCAGGAGGGACTTTTTTTTTTTAAGT
TAAGGGGAAAGGATCTGAACCTGAATTTAGCATCGACTGTTTATATTTTAACATTATCGA
TGCTAGTGAAGAGGGAAAGAATGGGAGTGGTGGGGGAGCGTGAATAGGGAGAACAAGTTT
GTGAAAGATTAAGGTCCTGTTCTCCAAGAGTTTCTACTTCTACTGAAGAGGTGGCGGGTG
ACATTTGAATACAATCTGTAGTCTAGTTTAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               247-365, + strand, RNAz p=0.610903

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               247-365, + strand, RNAz p=0.610903

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of BX647702, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of BX647702, +

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               58-503, gnl|bosTau2|chr6 (4648813-4649262)
               

               
               58-503, gnl|Hg17|chr4 (113531793-113532224)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               58-503, gnl|bosTau2|chr6 (4648813-4649262)
               

               
               58-503, gnl|Hg17|chr4 (113531793-113532224)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	58-503, gnl\|bosTau2\|chr6 (4648813-4649262)
	58-503, gnl\|Hg17\|chr4 (113531793-113532224)