Non-Coding RNA Search

rebs04c_b20.y1

Sequence:


               
               ATTAAAAAAATTACCCCATGGCTTTGAAAACAATAGAATTCAGTGCCTGAATTGCCAAGT
TAACCAGTAGTGGCTACATAGATAGCAGCAGGAATGTAATATAATTGGAGGCTGGAAAAG
AGTAATTCTTGGGGTACTTGCTACCCCTCTCTTCTTAAAAAAACAGCAATCCTTGGACTT
TTTAATAGTTGTTTGCAGTTGGAAACATTCTCTCATGTTTGCTTCTCTCCCCCAACTAGA
GATCACATTGGACTTTATTAAAACATCTACCATGTCCAAATGATTGTATTTTTATCTTCA
GCAAATTATATCTGAAATCTTTTGCAGCAATAAGACTAAAGATGAGGCTCAAATTTTTGG
AGGGATCTCTGCTTCAGTAGGGGCAACGTGTTTGTGTTACTTCTGTCAAAATGGTTTTAC
CTCAAATAATCCATTTCATGGGATCATGCTTACTGTAAACATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTAAAAAAATTACCCCATGGCTTTGAAAACAATAGAATTCAGTGCCTGAATTGCCAAGT
TAACCAGTAGTGGCTACATAGATAGCAGCAGGAATGTAATATAATTGGAGGCTGGAAAAG
AGTAATTCTTGGGGTACTTGCTACCCCTCTCTTCTTAAAAAAACAGCAATCCTTGGACTT
TTTAATAGTTGTTTGCAGTTGGAAACATTCTCTCATGTTTGCTTCTCTCCCCCAACTAGA
GATCACATTGGACTTTATTAAAACATCTACCATGTCCAAATGATTGTATTTTTATCTTCA
GCAAATTATATCTGAAATCTTTTGCAGCAATAAGACTAAAGATGAGGCTCAAATTTTTGG
AGGGATCTCTGCTTCAGTAGGGGCAACGTGTTTGTGTTACTTCTGTCAAAATGGTTTTAC
CTCAAATAATCCATTTCATGGGATCATGCTTACTGTAAACATA

Aligned organism(s): 13 entry(ies)

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Aligned organism(s): 13 entry(ies)

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               4-452, gnl|bosTau2|chr9 (33549292-33548839)
               

               
               4-452, gnl|canFam2|chr12 (60494760-60495250)
               

               
               4-452, gnl|dasNov1|scaffold_125748 (3485-3961)
               

               
               4-452, gnl|echTel1|scaffold_325245 (8509-8966)
               

               
               4-452, gnl|hg17|chr6 (99829172-99829660)
               

               
               4-452, gnl|Hg17|chr6 (99829673-99829206)
               

               
               4-452, gnl|loxAfr1|scaffold_28043 (10312-9852)
               

               
               4-452, gnl|mm7|chr4 (22003491-22003088)
               

               
               4-452, gnl|monDom2|scaffold_0 (124637472-124637000)
               

               
               4-452, gnl|oryCun1|scaffold_202945 (43280-43698)
               

               
               4-452, gnl|panTro1|chr5 (101813015-101813503)
               

               
               4-452, gnl|rheMac2|chr4 (95218067-95218534)
               

               
               4-452, gnl|rn3|chr5 (36743905-36743515)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-452, gnl|bosTau2|chr9 (33549292-33548839)
               

               
               4-452, gnl|canFam2|chr12 (60494760-60495250)
               

               
               4-452, gnl|dasNov1|scaffold_125748 (3485-3961)
               

               
               4-452, gnl|echTel1|scaffold_325245 (8509-8966)
               

               
               4-452, gnl|hg17|chr6 (99829172-99829660)
               

               
               4-452, gnl|Hg17|chr6 (99829673-99829206)
               

               
               4-452, gnl|loxAfr1|scaffold_28043 (10312-9852)
               

               
               4-452, gnl|mm7|chr4 (22003491-22003088)
               

               
               4-452, gnl|monDom2|scaffold_0 (124637472-124637000)
               

               
               4-452, gnl|oryCun1|scaffold_202945 (43280-43698)
               

               
               4-452, gnl|panTro1|chr5 (101813015-101813503)
               

               
               4-452, gnl|rheMac2|chr4 (95218067-95218534)
               

               
               4-452, gnl|rn3|chr5 (36743905-36743515)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	4-452, gnl\|bosTau2\|chr9 (33549292-33548839)
	4-452, gnl\|canFam2\|chr12 (60494760-60495250)
	4-452, gnl\|dasNov1\|scaffold_125748 (3485-3961)
	4-452, gnl\|echTel1\|scaffold_325245 (8509-8966)
	4-452, gnl\|hg17\|chr6 (99829172-99829660)
	4-452, gnl\|Hg17\|chr6 (99829673-99829206)
	4-452, gnl\|loxAfr1\|scaffold_28043 (10312-9852)
	4-452, gnl\|mm7\|chr4 (22003491-22003088)
	4-452, gnl\|monDom2\|scaffold_0 (124637472-124637000)
	4-452, gnl\|oryCun1\|scaffold_202945 (43280-43698)
	4-452, gnl\|panTro1\|chr5 (101813015-101813503)
	4-452, gnl\|rheMac2\|chr4 (95218067-95218534)
	4-452, gnl\|rn3\|chr5 (36743905-36743515)