Non-Coding RNA Search

rebs05c_g18.y1

Sequence:


               
               TGGCCCTCCTGGACCTCAGCCTGGCGTTCCTGTTCTCCCAGCTCCTTACCTGAGGCTCCT
GCCTGGCCTACTTCTCTTCACTCCTCTGACCTGCCTTTTTCTCTTTCCTTCCTCCTGGTT
GTTTTTGCTCCTTTCTTCCTCTCCTCCCTTCCCTTTCTTTTCTGTCCCCCTCTGGTTTTG
TCTCTTGCTTTTTCTTTCTCCTTTCAGATTCTCTCATTTCTCCTGGCTCCGCCTCTGTCT
TCCTCACTCCCCTCCCCACCCACCCCTTCTCTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGCCCTCCTGGACCTCAGCCTGGCGTTCCTGTTCTCCCAGCTCCTTACCTGAGGCTCCT
GCCTGGCCTACTTCTCTTCACTCCTCTGACCTGCCTTTTTCTCTTTCCTTCCTCCTGGTT
GTTTTTGCTCCTTTCTTCCTCTCCTCCCTTCCCTTTCTTTTCTGTCCCCCTCTGGTTTTG
TCTCTTGCTTTTTCTTTCTCCTTTCAGATTCTCTCATTTCTCCTGGCTCCGCCTCTGTCT
TCCTCACTCCCCTCCCCACCCACCCCTTCTCTCTC

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               1-275, gnl|bosTau2|chr10 (13610623-13610926)
               

               
               1-275, gnl|canFam2|chr8 (6800084-6800719)
               

               
               1-275, gnl|dasNov1|scaffold_25365 (9520-8910)
               

               
               1-275, gnl|hg17|chr14 (23108068-23108695)
               

               
               1-275, gnl|Hg17|chr14 (23108735-23108435)
               

               
               1-275, gnl|mm7|chr14 (49974196-49974772)
               

               
               1-275, gnl|Mm7|chr14 (49974812-49974524)
               

               
               1-275, gnl|monDom2|scaffold_12 (26114300-26113603)
               

               
               1-275, gnl|oryCun1|scaffold_211309 (38187-37654)
               

               
               1-275, gnl|panTro1|chr15 (22078242-22078868)
               

               
               1-275, gnl|rheMac2|chr7 (86408317-86408945)
               

               
               1-275, gnl|rn3|chr15 (33229681-33230255)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-275, gnl|bosTau2|chr10 (13610623-13610926)
               

               
               1-275, gnl|canFam2|chr8 (6800084-6800719)
               

               
               1-275, gnl|dasNov1|scaffold_25365 (9520-8910)
               

               
               1-275, gnl|hg17|chr14 (23108068-23108695)
               

               
               1-275, gnl|Hg17|chr14 (23108735-23108435)
               

               
               1-275, gnl|mm7|chr14 (49974196-49974772)
               

               
               1-275, gnl|Mm7|chr14 (49974812-49974524)
               

               
               1-275, gnl|monDom2|scaffold_12 (26114300-26113603)
               

               
               1-275, gnl|oryCun1|scaffold_211309 (38187-37654)
               

               
               1-275, gnl|panTro1|chr15 (22078242-22078868)
               

               
               1-275, gnl|rheMac2|chr7 (86408317-86408945)
               

               
               1-275, gnl|rn3|chr15 (33229681-33230255)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	1-275, gnl\|bosTau2\|chr10 (13610623-13610926)
	1-275, gnl\|canFam2\|chr8 (6800084-6800719)
	1-275, gnl\|dasNov1\|scaffold_25365 (9520-8910)
	1-275, gnl\|hg17\|chr14 (23108068-23108695)
	1-275, gnl\|Hg17\|chr14 (23108735-23108435)
	1-275, gnl\|mm7\|chr14 (49974196-49974772)
	1-275, gnl\|Mm7\|chr14 (49974812-49974524)
	1-275, gnl\|monDom2\|scaffold_12 (26114300-26113603)
	1-275, gnl\|oryCun1\|scaffold_211309 (38187-37654)
	1-275, gnl\|panTro1\|chr15 (22078242-22078868)
	1-275, gnl\|rheMac2\|chr7 (86408317-86408945)
	1-275, gnl\|rn3\|chr15 (33229681-33230255)