Non-Coding RNA Search

rebs13c_j6.y1

Sequence:


               
               ATTTTAAGCAGCTCTTTTTTATCTATAATCCTGATATTTCATACTGAAGACACAGAGTCC
TTTCACTTGTCTTTAACACTAGAAAGGATTTCTCTTTGCTAAGGACTGATGATTTGAAGT
AGTTCTCAGTCTTTGAGGTACAGGTTTATAACACTGCTTTTTGTCTCTAATCATAGCCCA
TAATGGCAAATACAACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTAAGCAGCTCTTTTTTATCTATAATCCTGATATTTCATACTGAAGACACAGAGTCC
TTTCACTTGTCTTTAACACTAGAAAGGATTTCTCTTTGCTAAGGACTGATGATTTGAAGT
AGTTCTCAGTCTTTGAGGTACAGGTTTATAACACTGCTTTTTGTCTCTAATCATAGCCCA
TAATGGCAAATACAACT

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               89-197, gnl|bosTau2|chrX (19462610-19462500)
               

               
               89-197, gnl|canFam2|chrX (87476018-87476246)
               

               
               89-197, gnl|dasNov1|scaffold_28752 (50762-50984)
               

               
               89-197, gnl|echTel1|scaffold_311962 (137182-136955)
               

               
               89-197, gnl|galGal2|chr4 (13052723-13052469)
               

               
               89-197, gnl|hg17|chrX (110349586-110349814)
               

               
               89-197, gnl|Hg17|chrX (110349709-110349597)
               

               
               89-197, gnl|loxAfr1|scaffold_901 (4625-4398)
               

               
               89-197, gnl|mm7|chrX (138526441-138526664)
               

               
               89-197, gnl|Mm7|chrX (138526586-138526452)
               

               
               89-197, gnl|oryCun1|scaffold_199253 (83172-82947)
               

               
               89-197, gnl|panTro1|chrX (114088586-114088815)
               

               
               89-197, gnl|rheMac2|chrX (109978641-109978869)
               

               
               89-197, gnl|rn3|chrX (34719627-34719405)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               89-197, gnl|bosTau2|chrX (19462610-19462500)
               

               
               89-197, gnl|canFam2|chrX (87476018-87476246)
               

               
               89-197, gnl|dasNov1|scaffold_28752 (50762-50984)
               

               
               89-197, gnl|echTel1|scaffold_311962 (137182-136955)
               

               
               89-197, gnl|galGal2|chr4 (13052723-13052469)
               

               
               89-197, gnl|hg17|chrX (110349586-110349814)
               

               
               89-197, gnl|Hg17|chrX (110349709-110349597)
               

               
               89-197, gnl|loxAfr1|scaffold_901 (4625-4398)
               

               
               89-197, gnl|mm7|chrX (138526441-138526664)
               

               
               89-197, gnl|Mm7|chrX (138526586-138526452)
               

               
               89-197, gnl|oryCun1|scaffold_199253 (83172-82947)
               

               
               89-197, gnl|panTro1|chrX (114088586-114088815)
               

               
               89-197, gnl|rheMac2|chrX (109978641-109978869)
               

               
               89-197, gnl|rn3|chrX (34719627-34719405)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	89-197, gnl\|bosTau2\|chrX (19462610-19462500)
	89-197, gnl\|canFam2\|chrX (87476018-87476246)
	89-197, gnl\|dasNov1\|scaffold_28752 (50762-50984)
	89-197, gnl\|echTel1\|scaffold_311962 (137182-136955)
	89-197, gnl\|galGal2\|chr4 (13052723-13052469)
	89-197, gnl\|hg17\|chrX (110349586-110349814)
	89-197, gnl\|Hg17\|chrX (110349709-110349597)
	89-197, gnl\|loxAfr1\|scaffold_901 (4625-4398)
	89-197, gnl\|mm7\|chrX (138526441-138526664)
	89-197, gnl\|Mm7\|chrX (138526586-138526452)
	89-197, gnl\|oryCun1\|scaffold_199253 (83172-82947)
	89-197, gnl\|panTro1\|chrX (114088586-114088815)
	89-197, gnl\|rheMac2\|chrX (109978641-109978869)
	89-197, gnl\|rn3\|chrX (34719627-34719405)