Non-Coding RNA Search

rebs16c_l3.y1

Sequence:


               
               ATGCTAAGATCTAAATGCAAAATCTATCATTCAGAAGGGTTTAAAGAATTCAGGCTATCT
CTGAAGAACTTGGCTCCAGATGGATTACCCCAATTTACAACTGCGGGTTTCAGCCGTGAC
GAATTGATCTGATCTCAGTTCATTTGACTCGGCTGTGCCCACAGGACTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGCTAAGATCTAAATGCAAAATCTATCATTCAGAAGGGTTTAAAGAATTCAGGCTATCT
CTGAAGAACTTGGCTCCAGATGGATTACCCCAATTTACAACTGCGGGTTTCAGCCGTGAC
GAATTGATCTGATCTCAGTTCATTTGACTCGGCTGTGCCCACAGGACTCTG

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               1-171, gnl|bosTau2|chr5 (7909295-7909471)
               

               
               1-171, gnl|canFam2|chr15 (26109075-26109590)
               

               
               1-171, gnl|dasNov1|scaffold_7650 (51571-52074)
               

               
               1-171, gnl|echTel1|scaffold_281630 (41695-42230)
               

               
               1-171, gnl|hg17|chr12 (79690727-79691252)
               

               
               1-171, gnl|Hg17|chr12 (79690941-79690767)
               

               
               1-171, gnl|loxAfr1|scaffold_24595 (34829-34307)
               

               
               1-171, gnl|mm7|chr10 (106885799-106885296)
               

               
               1-171, gnl|Mm7|chr10 (106885595-106885770)
               

               
               1-171, gnl|monDom2|scaffold_36 (14423185-14423705)
               

               
               1-171, gnl|oryCun1|scaffold_189650 (67205-67725)
               

               
               1-171, gnl|panTro1|chr10 (81512287-81512812)
               

               
               1-171, gnl|rheMac2|chr11 (77731749-77732273)
               

               
               1-171, gnl|rn3|chr7 (46147436-46146942)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-171, gnl|bosTau2|chr5 (7909295-7909471)
               

               
               1-171, gnl|canFam2|chr15 (26109075-26109590)
               

               
               1-171, gnl|dasNov1|scaffold_7650 (51571-52074)
               

               
               1-171, gnl|echTel1|scaffold_281630 (41695-42230)
               

               
               1-171, gnl|hg17|chr12 (79690727-79691252)
               

               
               1-171, gnl|Hg17|chr12 (79690941-79690767)
               

               
               1-171, gnl|loxAfr1|scaffold_24595 (34829-34307)
               

               
               1-171, gnl|mm7|chr10 (106885799-106885296)
               

               
               1-171, gnl|Mm7|chr10 (106885595-106885770)
               

               
               1-171, gnl|monDom2|scaffold_36 (14423185-14423705)
               

               
               1-171, gnl|oryCun1|scaffold_189650 (67205-67725)
               

               
               1-171, gnl|panTro1|chr10 (81512287-81512812)
               

               
               1-171, gnl|rheMac2|chr11 (77731749-77732273)
               

               
               1-171, gnl|rn3|chr7 (46147436-46146942)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	1-171, gnl\|bosTau2\|chr5 (7909295-7909471)
	1-171, gnl\|canFam2\|chr15 (26109075-26109590)
	1-171, gnl\|dasNov1\|scaffold_7650 (51571-52074)
	1-171, gnl\|echTel1\|scaffold_281630 (41695-42230)
	1-171, gnl\|hg17\|chr12 (79690727-79691252)
	1-171, gnl\|Hg17\|chr12 (79690941-79690767)
	1-171, gnl\|loxAfr1\|scaffold_24595 (34829-34307)
	1-171, gnl\|mm7\|chr10 (106885799-106885296)
	1-171, gnl\|Mm7\|chr10 (106885595-106885770)
	1-171, gnl\|monDom2\|scaffold_36 (14423185-14423705)
	1-171, gnl\|oryCun1\|scaffold_189650 (67205-67725)
	1-171, gnl\|panTro1\|chr10 (81512287-81512812)
	1-171, gnl\|rheMac2\|chr11 (77731749-77732273)
	1-171, gnl\|rn3\|chr7 (46147436-46146942)