Non-Coding RNA Search

rebs19c_c6.y1

Sequence:


               
               ACAAAACAAACAAATGAAGAACAAGACAAGCTGCCTGGCAAAGCAGACTGACTTGATCCG
CCTGGGCTGAAAACTGCAGTTCTGCTTTCCCTTCATACCTGCCTGTGGTATGTCCAGAGG
AAAGAACCTCATATCTACTCCCCACAAAACGTGTAACATATTTAATTTACCAGATTGGGA
AAGAGTTCTTTTAATCCAATTTCTGACTATGTTTTGCAGTTAACATCCCCGAACACAGAG
AAGTAAGAGTTAGGACCGTGTGGAATGAAGGAGGAAAAAAATCATCACTTGATGCCCATG
ATTATAAAGCCATGCCCAGTGTGCTGTCTTATTTACCATTTTTCCCTATACCTGTGTGAG
AGGTGGTCCCATCTCATTTGGCAAGAAGCAGACAGGCCCTCAGAAAAGAGAAGGGACTTG
CCCAAGGTAGTGGTCAGGATTTCAAACTTCATACTCCCAGGTTCAAGGTCTCAGCAACAC
TCACACAACTGATCTAAAGAGACTGAAATATGGAGCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAAAACAAACAAATGAAGAACAAGACAAGCTGCCTGGCAAAGCAGACTGACTTGATCCG
CCTGGGCTGAAAACTGCAGTTCTGCTTTCCCTTCATACCTGCCTGTGGTATGTCCAGAGG
AAAGAACCTCATATCTACTCCCCACAAAACGTGTAACATATTTAATTTACCAGATTGGGA
AAGAGTTCTTTTAATCCAATTTCTGACTATGTTTTGCAGTTAACATCCCCGAACACAGAG
AAGTAAGAGTTAGGACCGTGTGGAATGAAGGAGGAAAAAAATCATCACTTGATGCCCATG
ATTATAAAGCCATGCCCAGTGTGCTGTCTTATTTACCATTTTTCCCTATACCTGTGTGAG
AGGTGGTCCCATCTCATTTGGCAAGAAGCAGACAGGCCCTCAGAAAAGAGAAGGGACTTG
CCCAAGGTAGTGGTCAGGATTTCAAACTTCATACTCCCAGGTTCAAGGTCTCAGCAACAC
TCACACAACTGATCTAAAGAGACTGAAATATGGAGCAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               196-518, gnl|bosTau2|chr7 (31381473-31381151)
               

               
               196-518, gnl|Hg17|chr5 (133591282-133591605)
               

               
               196-518, gnl|Mm7|chr11 (52054196-52053875)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               196-518, gnl|bosTau2|chr7 (31381473-31381151)
               

               
               196-518, gnl|Hg17|chr5 (133591282-133591605)
               

               
               196-518, gnl|Mm7|chr11 (52054196-52053875)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	196-518, gnl\|bosTau2\|chr7 (31381473-31381151)
	196-518, gnl\|Hg17\|chr5 (133591282-133591605)
	196-518, gnl\|Mm7\|chr11 (52054196-52053875)