Non-Coding RNA Search

rebs20c_o5.y1

Sequence:


               
               GGTGGTTCGGGTTCTCTGTGAGCGCGGCTGTGACGTCAACCTCCCCGATGCTCACGCTGA
CACACCCCTGCACTGCGCCATCTCGGCGGGCACTGGTGCCACTGGCATTGTGGAGGTCCT
CACTGAGGTGCCCGGCATTGACGTCACTGCCACCAACAGCCAAGGCTTCACCCTGCTGCA
CCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGGTTCGGGTTCTCTGTGAGCGCGGCTGTGACGTCAACCTCCCCGATGCTCACGCTGA
CACACCCCTGCACTGCGCCATCTCGGCGGGCACTGGTGCCACTGGCATTGTGGAGGTCCT
CACTGAGGTGCCCGGCATTGACGTCACTGCCACCAACAGCCAAGGCTTCACCCTGCTGCA
CCA

Aligned organism(s): 16 entry(ies)

More info

Aligned organism(s): 16 entry(ies)

Help | Less info


               
               47-183, gnl|bosTau2|chr16 (37695971-37695835)
               

               
               47-183, gnl|canFam2|chr5 (59692318-59692493)
               

               
               47-183, gnl|danRer3|chr9 (4923271-4923114)
               

               
               47-183, gnl|echTel1|scaffold_295407 (6263-6438)
               

               
               47-183, gnl|fr1|chrUn (105126737-105126572)
               

               
               47-183, gnl|galGal2|chr21 (1948769-1948606)
               

               
               47-183, gnl|hg17|chr1_random (1261850-1262025)
               

               
               47-183, gnl|Hg17|chr1_random (1261854-1261990)
               

               
               47-183, gnl|loxAfr1|scaffold_44970 (303-128)
               

               
               47-183, gnl|mm7|chr4 (154646354-154646179)
               

               
               47-183, gnl|Mm7|chr4 (154646348-154646212)
               

               
               47-183, gnl|monDom2|scaffold_196 (599109-599299)
               

               
               47-183, gnl|rheMac2|chr1 (4690808-4690983)
               

               
               47-183, gnl|rn3|chr5 (172503512-172503337)
               

               
               47-183, gnl|tetNig1|chrUn_random (28282634-28282803)
               

               
               47-183, gnl|xenTro1|scaffold_5404 (12159-12341)

Aligned organism(s): 16 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               47-183, gnl|bosTau2|chr16 (37695971-37695835)
               

               
               47-183, gnl|canFam2|chr5 (59692318-59692493)
               

               
               47-183, gnl|danRer3|chr9 (4923271-4923114)
               

               
               47-183, gnl|echTel1|scaffold_295407 (6263-6438)
               

               
               47-183, gnl|fr1|chrUn (105126737-105126572)
               

               
               47-183, gnl|galGal2|chr21 (1948769-1948606)
               

               
               47-183, gnl|hg17|chr1_random (1261850-1262025)
               

               
               47-183, gnl|Hg17|chr1_random (1261854-1261990)
               

               
               47-183, gnl|loxAfr1|scaffold_44970 (303-128)
               

               
               47-183, gnl|mm7|chr4 (154646354-154646179)
               

               
               47-183, gnl|Mm7|chr4 (154646348-154646212)
               

               
               47-183, gnl|monDom2|scaffold_196 (599109-599299)
               

               
               47-183, gnl|rheMac2|chr1 (4690808-4690983)
               

               
               47-183, gnl|rn3|chr5 (172503512-172503337)
               

               
               47-183, gnl|tetNig1|chrUn_random (28282634-28282803)
               

               
               47-183, gnl|xenTro1|scaffold_5404 (12159-12341)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	47-183, gnl\|bosTau2\|chr16 (37695971-37695835)
	47-183, gnl\|canFam2\|chr5 (59692318-59692493)
	47-183, gnl\|danRer3\|chr9 (4923271-4923114)
	47-183, gnl\|echTel1\|scaffold_295407 (6263-6438)
	47-183, gnl\|fr1\|chrUn (105126737-105126572)
	47-183, gnl\|galGal2\|chr21 (1948769-1948606)
	47-183, gnl\|hg17\|chr1_random (1261850-1262025)
	47-183, gnl\|Hg17\|chr1_random (1261854-1261990)
	47-183, gnl\|loxAfr1\|scaffold_44970 (303-128)
	47-183, gnl\|mm7\|chr4 (154646354-154646179)
	47-183, gnl\|Mm7\|chr4 (154646348-154646212)
	47-183, gnl\|monDom2\|scaffold_196 (599109-599299)
	47-183, gnl\|rheMac2\|chr1 (4690808-4690983)
	47-183, gnl\|rn3\|chr5 (172503512-172503337)
	47-183, gnl\|tetNig1\|chrUn_random (28282634-28282803)
	47-183, gnl\|xenTro1\|scaffold_5404 (12159-12341)