Non-Coding RNA Search

rebs23c_b7.y1

Sequence:


               
               CACATGGTTGAAATATAACACGGGTGCAGCTGTCCCAGGTCTTCCTGGCAAGAGCCCCCT
TTTAGTTCCAGAGGCTGCTCTGGTGAGATTGACTTACAAATGGGAAAGCCTTAACACAGC
CTTGTGATGCAGCTCATAAATTCAGTGGAAATTCAATACAGCGGAATAAATTCTTTTCTT
CAACCCTTGCATTGTGAGTCATAGGGGAAAAGAGTAGGAGGCAAACAATTTAAGTTAGTT
TTTAAAAACTTTCCACTGAGggagttcccttcctggctcagtggttaatgcatctacaaa
ccatgagggtgtgtgttcgatccctggccttgctcagtgggttaaggatccagcgttgcc
gtgagctgtcgtgtagACCCCTAGCCTGGGAACCTCCATATGCCATCATGTGGCCCTAAA
AAGCAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACATGGTTGAAATATAACACGGGTGCAGCTGTCCCAGGTCTTCCTGGCAAGAGCCCCCT
TTTAGTTCCAGAGGCTGCTCTGGTGAGATTGACTTACAAATGGGAAAGCCTTAACACAGC
CTTGTGATGCAGCTCATAAATTCAGTGGAAATTCAATACAGCGGAATAAATTCTTTTCTT
CAACCCTTGCATTGTGAGTCATAGGGGAAAAGAGTAGGAGGCAAACAATTTAAGTTAGTT
TTTAAAAACTTTCCACTGAGggagttcccttcctggctcagtggttaatgcatctacaaa
ccatgagggtgtgtgttcgatccctggccttgctcagtgggttaaggatccagcgttgcc
gtgagctgtcgtgtagACCCCTAGCCTGGGAACCTCCATATGCCATCATGTGGCCCTAAA
AAGCAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               2-268, gnl|bosTau2|chr19 (37600073-37600338)
               

               
               2-268, gnl|canFam2|chr9 (22100755-22100492)
               

               
               2-268, gnl|dasNov1|scaffold_40799 (14113-14376)
               

               
               2-268, gnl|hg17|chr17 (40120591-40120849)
               

               
               2-268, gnl|Hg17|chr17 (40120888-40120629)
               

               
               2-268, gnl|loxAfr1|scaffold_177464 (252-4)
               

               
               2-268, gnl|mm7|chr11 (102804354-102804567)
               

               
               2-268, gnl|Mm7|chr11 (102804608-102804387)
               

               
               2-268, gnl|oryCun1|scaffold_23516 (4313-4071)
               

               
               2-268, gnl|panTro1|chr19 (43328715-43328973)
               

               
               2-268, gnl|rheMac2|chr16 (54775025-54775283)
               

               
               2-268, gnl|rn3|chr10 (91825247-91825443)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-268, gnl|bosTau2|chr19 (37600073-37600338)
               

               
               2-268, gnl|canFam2|chr9 (22100755-22100492)
               

               
               2-268, gnl|dasNov1|scaffold_40799 (14113-14376)
               

               
               2-268, gnl|hg17|chr17 (40120591-40120849)
               

               
               2-268, gnl|Hg17|chr17 (40120888-40120629)
               

               
               2-268, gnl|loxAfr1|scaffold_177464 (252-4)
               

               
               2-268, gnl|mm7|chr11 (102804354-102804567)
               

               
               2-268, gnl|Mm7|chr11 (102804608-102804387)
               

               
               2-268, gnl|oryCun1|scaffold_23516 (4313-4071)
               

               
               2-268, gnl|panTro1|chr19 (43328715-43328973)
               

               
               2-268, gnl|rheMac2|chr16 (54775025-54775283)
               

               
               2-268, gnl|rn3|chr10 (91825247-91825443)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	2-268, gnl\|bosTau2\|chr19 (37600073-37600338)
	2-268, gnl\|canFam2\|chr9 (22100755-22100492)
	2-268, gnl\|dasNov1\|scaffold_40799 (14113-14376)
	2-268, gnl\|hg17\|chr17 (40120591-40120849)
	2-268, gnl\|Hg17\|chr17 (40120888-40120629)
	2-268, gnl\|loxAfr1\|scaffold_177464 (252-4)
	2-268, gnl\|mm7\|chr11 (102804354-102804567)
	2-268, gnl\|Mm7\|chr11 (102804608-102804387)
	2-268, gnl\|oryCun1\|scaffold_23516 (4313-4071)
	2-268, gnl\|panTro1\|chr19 (43328715-43328973)
	2-268, gnl\|rheMac2\|chr16 (54775025-54775283)
	2-268, gnl\|rn3\|chr10 (91825247-91825443)