Non-Coding RNA Search

recc2801c_h19.y1

Sequence:


               
               AGCCTGTGAACTGAAAAAAGAAAAAATCTCGTCAAAGCAAGTGAGATGAAAACGATTTTA
ACCATTGTATTTTGAATTGATTAGAAGAGAAGGGGAGAGACCAGTCACAGTAGACTATGG
CTGACTTAAACAGAACCTGAATCAGAGATTTAGCTATTAAAATGAAGAAAGAGAGACTGA
TTTTATCTCTATTGTTAAAAAAAAATGTGGTAGGATTTGGTGACTAATTCAGCATGGAGT
GCGGAGAGAAAAAAAAGAGCCACAACAACTCTGGGCTCTGTGCCTTGGGGAGCCGGGGCT
TGGGGATTCTTTCCACAATGACAGCAGATTTGAGTGGGGCCTGATGGTTTCTCTGGGAAG
ATGATCTTGTTTTCACAATAGATAGCATAAAATAGAGATGAGCCCTGGAGGGAAGGAGAG
GTCAGAATAACAGGAAACACTGTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCCTGTGAACTGAAAAAAGAAAAAATCTCGTCAAAGCAAGTGAGATGAAAACGATTTTA
ACCATTGTATTTTGAATTGATTAGAAGAGAAGGGGAGAGACCAGTCACAGTAGACTATGG
CTGACTTAAACAGAACCTGAATCAGAGATTTAGCTATTAAAATGAAGAAAGAGAGACTGA
TTTTATCTCTATTGTTAAAAAAAAATGTGGTAGGATTTGGTGACTAATTCAGCATGGAGT
GCGGAGAGAAAAAAAAGAGCCACAACAACTCTGGGCTCTGTGCCTTGGGGAGCCGGGGCT
TGGGGATTCTTTCCACAATGACAGCAGATTTGAGTGGGGCCTGATGGTTTCTCTGGGAAG
ATGATCTTGTTTTCACAATAGATAGCATAAAATAGAGATGAGCCCTGGAGGGAAGGAGAG
GTCAGAATAACAGGAAACACTGTGGG

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

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               14-446, gnl|bosTau2|chr10 (18605718-18605289)
               

               
               14-446, gnl|canFam2|chr30 (7459022-7459868)
               

               
               14-446, gnl|dasNov1|scaffold_1411 (113823-114639)
               

               
               14-446, gnl|echTel1|scaffold_323272 (159585-158566)
               

               
               14-446, gnl|hg17|chr15 (35017614-35018450)
               

               
               14-446, gnl|Hg17|chr15 (35018198-35017777)
               

               
               14-446, gnl|mm7|chr2 (115650204-115651043)
               

               
               14-446, gnl|Mm7|chr2 (115650801-115650369)
               

               
               14-446, gnl|monDom2|scaffold_12 (6923166-6922366)
               

               
               14-446, gnl|oryCun1|scaffold_205389 (105653-104834)
               

               
               14-446, gnl|panTro1|chr16 (34822209-34823045)
               

               
               14-446, gnl|rheMac2|chr7 (15264596-15265422)
               

               
               14-446, gnl|rn3|chr3 (101858364-101859194)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-446, gnl|bosTau2|chr10 (18605718-18605289)
               

               
               14-446, gnl|canFam2|chr30 (7459022-7459868)
               

               
               14-446, gnl|dasNov1|scaffold_1411 (113823-114639)
               

               
               14-446, gnl|echTel1|scaffold_323272 (159585-158566)
               

               
               14-446, gnl|hg17|chr15 (35017614-35018450)
               

               
               14-446, gnl|Hg17|chr15 (35018198-35017777)
               

               
               14-446, gnl|mm7|chr2 (115650204-115651043)
               

               
               14-446, gnl|Mm7|chr2 (115650801-115650369)
               

               
               14-446, gnl|monDom2|scaffold_12 (6923166-6922366)
               

               
               14-446, gnl|oryCun1|scaffold_205389 (105653-104834)
               

               
               14-446, gnl|panTro1|chr16 (34822209-34823045)
               

               
               14-446, gnl|rheMac2|chr7 (15264596-15265422)
               

               
               14-446, gnl|rn3|chr3 (101858364-101859194)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	14-446, gnl\|bosTau2\|chr10 (18605718-18605289)
	14-446, gnl\|canFam2\|chr30 (7459022-7459868)
	14-446, gnl\|dasNov1\|scaffold_1411 (113823-114639)
	14-446, gnl\|echTel1\|scaffold_323272 (159585-158566)
	14-446, gnl\|hg17\|chr15 (35017614-35018450)
	14-446, gnl\|Hg17\|chr15 (35018198-35017777)
	14-446, gnl\|mm7\|chr2 (115650204-115651043)
	14-446, gnl\|Mm7\|chr2 (115650801-115650369)
	14-446, gnl\|monDom2\|scaffold_12 (6923166-6922366)
	14-446, gnl\|oryCun1\|scaffold_205389 (105653-104834)
	14-446, gnl\|panTro1\|chr16 (34822209-34823045)
	14-446, gnl\|rheMac2\|chr7 (15264596-15265422)
	14-446, gnl\|rn3\|chr3 (101858364-101859194)