Non-Coding RNA Search

recc2801c_p16.y1

Sequence:


               
               AGAGAACTAAGCCCACCGCGGCAGCCCGCGGCCGCGCACGGAGCCGGTGACAAGGGCGAG
CGGGCGGCGCCGAGCTCCACGTCTGCGCTCCGGCGGTGGCGGCGGCGGGAAGGAGGCCTA
GAAGATGGGGTGCGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAGAACTAAGCCCACCGCGGCAGCCCGCGGCCGCGCACGGAGCCGGTGACAAGGGCGAG
CGGGCGGCGCCGAGCTCCACGTCTGCGCTCCGGCGGTGGCGGCGGCGGGAAGGAGGCCTA
GAAGATGGGGTGCGCT

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

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               3-124, gnl|bosTau2|chr11 (6540365-6540486)
               

               
               3-124, gnl|canFam2|chr10 (41648707-41647789)
               

               
               3-124, gnl|echTel1|scaffold_294480 (195328-194395)
               

               
               3-124, gnl|hg17|chr2 (104919660-104920575)
               

               
               3-124, gnl|Hg17|chr2 (104920188-104920302)
               

               
               3-124, gnl|loxAfr1|scaffold_76673 (5306-6204)
               

               
               3-124, gnl|mm7|chr1 (42926737-42927679)
               

               
               3-124, gnl|Mm7|chr1 (42927271-42927388)
               

               
               3-124, gnl|monDom2|scaffold_11 (23672362-23673393)
               

               
               3-124, gnl|oryCun1|scaffold_199115 (166293-165367)
               

               
               3-124, gnl|panTro1|chr12 (107892750-107893662)
               

               
               3-124, gnl|rheMac2|chr13 (104749177-104750089)
               

               
               3-124, gnl|rn3|chr9 (41864269-41865227)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-124, gnl|bosTau2|chr11 (6540365-6540486)
               

               
               3-124, gnl|canFam2|chr10 (41648707-41647789)
               

               
               3-124, gnl|echTel1|scaffold_294480 (195328-194395)
               

               
               3-124, gnl|hg17|chr2 (104919660-104920575)
               

               
               3-124, gnl|Hg17|chr2 (104920188-104920302)
               

               
               3-124, gnl|loxAfr1|scaffold_76673 (5306-6204)
               

               
               3-124, gnl|mm7|chr1 (42926737-42927679)
               

               
               3-124, gnl|Mm7|chr1 (42927271-42927388)
               

               
               3-124, gnl|monDom2|scaffold_11 (23672362-23673393)
               

               
               3-124, gnl|oryCun1|scaffold_199115 (166293-165367)
               

               
               3-124, gnl|panTro1|chr12 (107892750-107893662)
               

               
               3-124, gnl|rheMac2|chr13 (104749177-104750089)
               

               
               3-124, gnl|rn3|chr9 (41864269-41865227)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	3-124, gnl\|bosTau2\|chr11 (6540365-6540486)
	3-124, gnl\|canFam2\|chr10 (41648707-41647789)
	3-124, gnl\|echTel1\|scaffold_294480 (195328-194395)
	3-124, gnl\|hg17\|chr2 (104919660-104920575)
	3-124, gnl\|Hg17\|chr2 (104920188-104920302)
	3-124, gnl\|loxAfr1\|scaffold_76673 (5306-6204)
	3-124, gnl\|mm7\|chr1 (42926737-42927679)
	3-124, gnl\|Mm7\|chr1 (42927271-42927388)
	3-124, gnl\|monDom2\|scaffold_11 (23672362-23673393)
	3-124, gnl\|oryCun1\|scaffold_199115 (166293-165367)
	3-124, gnl\|panTro1\|chr12 (107892750-107893662)
	3-124, gnl\|rheMac2\|chr13 (104749177-104750089)
	3-124, gnl\|rn3\|chr9 (41864269-41865227)