Non-Coding RNA Search

recc2802c_h15.y1

Sequence:


               
               AAGTATTTAACAGAAAGTTAAAAAAAAGAAAAAAAAAGTCCCATAAAACCCCACCTTGGG
TAAGTGATGGTTAAATATGGTACAAATAAAATGTATGCTATCCCCATTCCATTCCCAAAT
TAAATAAAAAAAACATGGTATAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTATTTAACAGAAAGTTAAAAAAAAGAAAAAAAAAGTCCCATAAAACCCCACCTTGGG
TAAGTGATGGTTAAATATGGTACAAATAAAATGTATGCTATCCCCATTCCATTCCCAAAT
TAAATAAAAAAAACATGGTATAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 16 entry(ies)

More info

Aligned organism(s): 16 entry(ies)

Help | Less info


               
               1-133, gnl|bosTau2|chr2 (31791547-31791414)
               

               
               1-133, gnl|canFam2|chr19 (52748784-52749188)
               

               
               1-133, gnl|dasNov1|scaffold_22721 (7108-6697)
               

               
               1-133, gnl|echTel1|scaffold_281887 (49165-48765)
               

               
               1-133, gnl|galGal2|chr7 (35218869-35219282)
               

               
               1-133, gnl|hg17|chr2 (148521756-148522148)
               

               
               1-133, gnl|Hg17|chr2 (148521996-148522114)
               

               
               1-133, gnl|loxAfr1|scaffold_34021 (11532-11939)
               

               
               1-133, gnl|mm7|chr2 (48910192-48910600)
               

               
               1-133, gnl|Mm7|chr2 (48910440-48910566)
               

               
               1-133, gnl|monDom2|scaffold_2 (38060714-38061141)
               

               
               1-133, gnl|oryCun1|scaffold_110720 (8991-8586)
               

               
               1-133, gnl|panTro1|chr13 (37566230-37566622)
               

               
               1-133, gnl|rheMac2|chr12 (11478417-11478811)
               

               
               1-133, gnl|rn3|chr3 (29707574-29707981)
               

               
               1-133, gnl|xenTro1|scaffold_216 (92642-92218)

Aligned organism(s): 16 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-133, gnl|bosTau2|chr2 (31791547-31791414)
               

               
               1-133, gnl|canFam2|chr19 (52748784-52749188)
               

               
               1-133, gnl|dasNov1|scaffold_22721 (7108-6697)
               

               
               1-133, gnl|echTel1|scaffold_281887 (49165-48765)
               

               
               1-133, gnl|galGal2|chr7 (35218869-35219282)
               

               
               1-133, gnl|hg17|chr2 (148521756-148522148)
               

               
               1-133, gnl|Hg17|chr2 (148521996-148522114)
               

               
               1-133, gnl|loxAfr1|scaffold_34021 (11532-11939)
               

               
               1-133, gnl|mm7|chr2 (48910192-48910600)
               

               
               1-133, gnl|Mm7|chr2 (48910440-48910566)
               

               
               1-133, gnl|monDom2|scaffold_2 (38060714-38061141)
               

               
               1-133, gnl|oryCun1|scaffold_110720 (8991-8586)
               

               
               1-133, gnl|panTro1|chr13 (37566230-37566622)
               

               
               1-133, gnl|rheMac2|chr12 (11478417-11478811)
               

               
               1-133, gnl|rn3|chr3 (29707574-29707981)
               

               
               1-133, gnl|xenTro1|scaffold_216 (92642-92218)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	1-133, gnl\|bosTau2\|chr2 (31791547-31791414)
	1-133, gnl\|canFam2\|chr19 (52748784-52749188)
	1-133, gnl\|dasNov1\|scaffold_22721 (7108-6697)
	1-133, gnl\|echTel1\|scaffold_281887 (49165-48765)
	1-133, gnl\|galGal2\|chr7 (35218869-35219282)
	1-133, gnl\|hg17\|chr2 (148521756-148522148)
	1-133, gnl\|Hg17\|chr2 (148521996-148522114)
	1-133, gnl\|loxAfr1\|scaffold_34021 (11532-11939)
	1-133, gnl\|mm7\|chr2 (48910192-48910600)
	1-133, gnl\|Mm7\|chr2 (48910440-48910566)
	1-133, gnl\|monDom2\|scaffold_2 (38060714-38061141)
	1-133, gnl\|oryCun1\|scaffold_110720 (8991-8586)
	1-133, gnl\|panTro1\|chr13 (37566230-37566622)
	1-133, gnl\|rheMac2\|chr12 (11478417-11478811)
	1-133, gnl\|rn3\|chr3 (29707574-29707981)
	1-133, gnl\|xenTro1\|scaffold_216 (92642-92218)