Non-Coding RNA Search

recc2807c_k13.y1

Sequence:


               
               AGGCAGGAAAGCCGCGGAAGATGGCGCCTTAAAGCGCCCGCGCCCACCTTGCCGAAGTGC
GCGGCCCAGTGCACCGGCGTCCAGCCGTAGAAGGAATCCTCGGCAGCCAGGCTTCCTGGG
ATGGAACCCGTACTTGAGCAGCTGTGCAGAGATAGACCAACGTGATGGTGGCTCCCTGAG
ACGGGCCACGCGGTTGCCGGGTATGAGAATGAGAAAGGAGGTCTGGTGAGTGTTCCTAAA
GCCACTCTTCCAAGTGCTTGGTTGCGGGTTTTGCCCAACGTGTCGAATGACGGCTAATGA
CAGGTTTTCTTAGGAGCTCTTTAGCTTTCCAAAAAGCTGTAGAGAAAAGAGAAAGAAGCG
CGGATTCATAACACATTCTTTGTCTTTTATTTGACAGAGCAACCACACATAAGTGACAAA
GGTTCCCTTCTTGACCAGACTCTACTCAGGCTCCCCCACCCCCCATATCTGCTAACCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGCAGGAAAGCCGCGGAAGATGGCGCCTTAAAGCGCCCGCGCCCACCTTGCCGAAGTGC
GCGGCCCAGTGCACCGGCGTCCAGCCGTAGAAGGAATCCTCGGCAGCCAGGCTTCCTGGG
ATGGAACCCGTACTTGAGCAGCTGTGCAGAGATAGACCAACGTGATGGTGGCTCCCTGAG
ACGGGCCACGCGGTTGCCGGGTATGAGAATGAGAAAGGAGGTCTGGTGAGTGTTCCTAAA
GCCACTCTTCCAAGTGCTTGGTTGCGGGTTTTGCCCAACGTGTCGAATGACGGCTAATGA
CAGGTTTTCTTAGGAGCTCTTTAGCTTTCCAAAAAGCTGTAGAGAAAAGAGAAAGAAGCG
CGGATTCATAACACATTCTTTGTCTTTTATTTGACAGAGCAACCACACATAAGTGACAAA
GGTTCCCTTCTTGACCAGACTCTACTCAGGCTCCCCCACCCCCCATATCTGCTAACCCT

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               3-110, gnl|bosTau2|chr12 (45980834-45980941)
               

               
               3-110, gnl|Hg17|chr13 (110365028-110365135)
               

               
               3-110, gnl|Mm7|chr8 (11603376-11603484)
               


               
               235-456, gnl|bosTau2|chr12 (45982631-45982843)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-110, gnl|bosTau2|chr12 (45980834-45980941)
               

               
               3-110, gnl|Hg17|chr13 (110365028-110365135)
               

               
               3-110, gnl|Mm7|chr8 (11603376-11603484)
               


               
               235-456, gnl|bosTau2|chr12 (45982631-45982843)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	3-110, gnl\|bosTau2\|chr12 (45980834-45980941)
	3-110, gnl\|Hg17\|chr13 (110365028-110365135)
	3-110, gnl\|Mm7\|chr8 (11603376-11603484)

	235-456, gnl\|bosTau2\|chr12 (45982631-45982843)