Non-Coding RNA Search

recc2812c_n15.y1

Sequence:


               
               GCCAGGCTGAGCGCCTCATCGGAAAATTAAGGCTGTGAGAACAGGACGGCTACTTATTTC
TTGGTTTCGTTAACATTTTTTAAAAAATTGAATACATCTTATTCAACAGGGGTTTATAAG
TGTGGGAGGTGCTGAACTGTGTGCACAGACTGGGCTCAGAATGATGGAATTCTTAGTTGG
GTGGAGAAGGTGACTTTTAAAAAGTAAACATGTAGGGGAGCTCCCTGGTAGTCTGGTGGT
TAGGACTCAGCAGTTTCACTGCTGCAGCCTGGGTTCAGTCCCTGGTCTGGGAACCGAGAT
CCCACATCAAGCTGCTGCATGGGGTGGCCAGAAAAACAAACAAACAAATATGTGGGCCAC
TGGCCCCGCTGCATGCCCAGCCCTGCCCCACAGCCCTGCGTGCCACTGAGTCGCTGAGCC
CCTGTGTGGTGGTTAGGGCGCTGCTGCTGCTGTTGGCCCAGTGGCTCCTGGTGCAGGCCC
GGTGCAGGCCCTCCATGCCCTTCACGCTGCCTCTCCGGGTGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCAGGCTGAGCGCCTCATCGGAAAATTAAGGCTGTGAGAACAGGACGGCTACTTATTTC
TTGGTTTCGTTAACATTTTTTAAAAAATTGAATACATCTTATTCAACAGGGGTTTATAAG
TGTGGGAGGTGCTGAACTGTGTGCACAGACTGGGCTCAGAATGATGGAATTCTTAGTTGG
GTGGAGAAGGTGACTTTTAAAAAGTAAACATGTAGGGGAGCTCCCTGGTAGTCTGGTGGT
TAGGACTCAGCAGTTTCACTGCTGCAGCCTGGGTTCAGTCCCTGGTCTGGGAACCGAGAT
CCCACATCAAGCTGCTGCATGGGGTGGCCAGAAAAACAAACAAACAAATATGTGGGCCAC
TGGCCCCGCTGCATGCCCAGCCCTGCCCCACAGCCCTGCGTGCCACTGAGTCGCTGAGCC
CCTGTGTGGTGGTTAGGGCGCTGCTGCTGCTGTTGGCCCAGTGGCTCCTGGTGCAGGCCC
GGTGCAGGCCCTCCATGCCCTTCACGCTGCCTCTCCGGGTGGC

ncRNA annotation: 1 entry(ies)

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               222-293, tRNA Glu : RF00005;tRNA; (AB113354.2/11128-11199), RaveNnA Score=34.96

ncRNA annotation: 1 entry(ies)

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PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               222-293, tRNA Glu : RF00005;tRNA; (AB113354.2/11128-11199), RaveNnA Score=34.96

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)