Non-Coding RNA Search

recc2820c_n4.y1

Sequence:


               
               CAGCGAGCAAGTTAGAGAGTGTTTAATCTTTGTTCTGCCGAATAATGTCGGTATAATTAC
CAAGTCAACTACAAGAGTGTGTATTTACAATATTTGCCGCGTAAGTGCTAATAATTATAT
GGTTATATGTGCCATGTAAAATATAGTGATATCCAATCTTCTGTTGTTTAAAATGTCTAG
ATTTAAGAGGATAATCTTGATCATCATTAGAAGGGCTTATTAAATCCCAGCGATATCCAG
GGCAAACCCACTGGTGGACCTGAACACAAAAGATCCGTAAGAGTGTTGGTGTTCGGATTG
CTGGATTAGGATGTACGTCTCTCGGTAGTCCTTGATCTTGCCGTGTTTCTGCATGCAGAT
TCTCCACTGACTTGAATCAAGATGGACAAGGGTCCCGGGACTCTGTCCCCACAGCGTCTG
CAGGCTTGTTGCATCTCACCACCAGAAACAGGCTTCCTCAGGTCTCTCACCTGTGGCCAA
CTTCAACTTTGTAAGACCCCTTCTTTTTAACTCTTCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCGAGCAAGTTAGAGAGTGTTTAATCTTTGTTCTGCCGAATAATGTCGGTATAATTAC
CAAGTCAACTACAAGAGTGTGTATTTACAATATTTGCCGCGTAAGTGCTAATAATTATAT
GGTTATATGTGCCATGTAAAATATAGTGATATCCAATCTTCTGTTGTTTAAAATGTCTAG
ATTTAAGAGGATAATCTTGATCATCATTAGAAGGGCTTATTAAATCCCAGCGATATCCAG
GGCAAACCCACTGGTGGACCTGAACACAAAAGATCCGTAAGAGTGTTGGTGTTCGGATTG
CTGGATTAGGATGTACGTCTCTCGGTAGTCCTTGATCTTGCCGTGTTTCTGCATGCAGAT
TCTCCACTGACTTGAATCAAGATGGACAAGGGTCCCGGGACTCTGTCCCCACAGCGTCTG
CAGGCTTGTTGCATCTCACCACCAGAAACAGGCTTCCTCAGGTCTCTCACCTGTGGCCAA
CTTCAACTTTGTAAGACCCCTTCTTTTTAACTCTTCCCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               8-519, gnl|bosTau2|chr5 (43943784-43943271)
               

               
               8-519, gnl|Hg17|chr10 (62300712-62300198)
               

               
               8-519, gnl|Mm7|chr10 (68893639-68894142)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-519, gnl|bosTau2|chr5 (43943784-43943271)
               

               
               8-519, gnl|Hg17|chr10 (62300712-62300198)
               

               
               8-519, gnl|Mm7|chr10 (68893639-68894142)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	8-519, gnl\|bosTau2\|chr5 (43943784-43943271)
	8-519, gnl\|Hg17\|chr10 (62300712-62300198)
	8-519, gnl\|Mm7\|chr10 (68893639-68894142)