Non-Coding RNA Search

recc2824c_h5.y1

Sequence:


               
               AACGAACCTGAGAAAGAGGACCTCGAGCCTGAAATCCGGATAGTAAACGGGAAGCCAAAG
AAAGTCCGGAAACCTCGAACCATCTACTCCAGTTTCCAGCTGGCAGCTCTTCAGCGGCGT
TTCCAAAAGACTCAATACCTGGCACTGCCCGAGCGAGCCGAGCTGGCGGCGTCTCTGGGC
CTCACCCAGACTCAGGTCAAAATCTGGTTCCAGAATCGCCGATCCAAGTTCAAGAAGATG
TGGAAGAGCGGTGAGATCCCTTCGGAGCAGCACCCGGGGGCCAGCGCCTCGCCACCTTGT
GCTTCGCCACCGGCCTCGGCACCCGCCTCCTGGGACTTCGGTGCGCCGCAGCGGATGGGA
GGCGGCGGCGGCCCGGGCAGCGGTGGCAGCGGCGCGGGTAGCTCCGGCTCCAGCCCGAGC
AGCGCGGCCTCGGCTTTCCTGGGCAACTACCCGTGGTACCACCAGGCCTCGAGCTCCGCC
ACGCACCTGCAGGCCGCGGCGCCGCTGCTGCACCCGACGCAGACCCCGCAGCCGCATCAC
CACCACCACCATCACCACGGCGGCGGGGGCGCCCCCGTGAGCGCGGGGACGATTTTCTAA
CCCCCAGAGACCGCGCCAGAGACTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACGAACCTGAGAAAGAGGACCTCGAGCCTGAAATCCGGATAGTAAACGGGAAGCCAAAG
AAAGTCCGGAAACCTCGAACCATCTACTCCAGTTTCCAGCTGGCAGCTCTTCAGCGGCGT
TTCCAAAAGACTCAATACCTGGCACTGCCCGAGCGAGCCGAGCTGGCGGCGTCTCTGGGC
CTCACCCAGACTCAGGTCAAAATCTGGTTCCAGAATCGCCGATCCAAGTTCAAGAAGATG
TGGAAGAGCGGTGAGATCCCTTCGGAGCAGCACCCGGGGGCCAGCGCCTCGCCACCTTGT
GCTTCGCCACCGGCCTCGGCACCCGCCTCCTGGGACTTCGGTGCGCCGCAGCGGATGGGA
GGCGGCGGCGGCCCGGGCAGCGGTGGCAGCGGCGCGGGTAGCTCCGGCTCCAGCCCGAGC
AGCGCGGCCTCGGCTTTCCTGGGCAACTACCCGTGGTACCACCAGGCCTCGAGCTCCGCC
ACGCACCTGCAGGCCGCGGCGCCGCTGCTGCACCCGACGCAGACCCCGCAGCCGCATCAC
CACCACCACCATCACCACGGCGGCGGGGGCGCCCCCGTGAGCGCGGGGACGATTTTCTAA
CCCCCAGAGACCGCGCCAGAGACTG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|62822408|gb|AAY14956.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|62822408|gb|AAY14956.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               10-200, gnl|bosTau2|chr4 (3234346-3234156)
               

               
               10-200, gnl|Hg17|chr7 (96296333-96296143)
               

               
               10-200, gnl|Mm7|chr6 (6832597-6832407)
               


               
               12-199, gnl|bosTau2|chr19 (29405190-29405377)
               

               
               12-199, gnl|Hg17|chr17 (45425946-45425759)
               

               
               12-199, gnl|Mm7|chr11 (95230754-95230941)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-200, gnl|bosTau2|chr4 (3234346-3234156)
               

               
               10-200, gnl|Hg17|chr7 (96296333-96296143)
               

               
               10-200, gnl|Mm7|chr6 (6832597-6832407)
               


               
               12-199, gnl|bosTau2|chr19 (29405190-29405377)
               

               
               12-199, gnl|Hg17|chr17 (45425946-45425759)
               

               
               12-199, gnl|Mm7|chr11 (95230754-95230941)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	10-200, gnl\|bosTau2\|chr4 (3234346-3234156)
	10-200, gnl\|Hg17\|chr7 (96296333-96296143)
	10-200, gnl\|Mm7\|chr6 (6832597-6832407)

	12-199, gnl\|bosTau2\|chr19 (29405190-29405377)
	12-199, gnl\|Hg17\|chr17 (45425946-45425759)
	12-199, gnl\|Mm7\|chr11 (95230754-95230941)