Non-Coding RNA Search

recc2826c_p23.y1

Sequence:


               
               GAGGTAAACCTATTTACATAGAAAAGGAAACAGCTTCCATGTTTGGGACAATCTCTGATT
TTAATAATTCCTTTAGAAAAGAAACAATCTAAAAGGTTACTGTAGTTTATCCTTTTTTTT
TTACTCACTGGGGGATTGAAACTATTCTACATGAGTTTTTAAAAGCACAGTTAGTGAGTG
GAATGATGGAATTTAGCCTTGAGCGTGCTGTTGGATAAACAGAAGCAGAATCTTCCAGGA
CAGATCATTCCCTGGGAGGACCTCGCGTCTATCAGTGAATCATTTTCTCACCAAGAAACT
GATCTGCACCTCTCACTACAGAACACCACACGTGAAATCTGAAAGACCAAGGATAATCTG
CAAACTCATTTATCAATAGTTAGTATAGGGATTAGCAAATTACATGAATTGGAGTTCTCG
CTATACTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGTAAACCTATTTACATAGAAAAGGAAACAGCTTCCATGTTTGGGACAATCTCTGATT
TTAATAATTCCTTTAGAAAAGAAACAATCTAAAAGGTTACTGTAGTTTATCCTTTTTTTT
TTACTCACTGGGGGATTGAAACTATTCTACATGAGTTTTTAAAAGCACAGTTAGTGAGTG
GAATGATGGAATTTAGCCTTGAGCGTGCTGTTGGATAAACAGAAGCAGAATCTTCCAGGA
CAGATCATTCCCTGGGAGGACCTCGCGTCTATCAGTGAATCATTTTCTCACCAAGAAACT
GATCTGCACCTCTCACTACAGAACACCACACGTGAAATCTGAAAGACCAAGGATAATCTG
CAAACTCATTTATCAATAGTTAGTATAGGGATTAGCAAATTACATGAATTGGAGTTCTCG
CTATACTTT

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

Help | Less info


               
               6-429, gnl|bosTau2|chr8 (53710341-53709919)
               

               
               6-429, gnl|canFam2|chr11 (68015397-68015956)
               

               
               6-429, gnl|dasNov1|scaffold_15198 (53985-54500)
               

               
               6-429, gnl|echTel1|scaffold_276292 (265-805)
               

               
               6-429, gnl|hg17|chr9 (109787194-109787752)
               

               
               6-429, gnl|Hg17|chr9 (109787369-109787800)
               

               
               6-429, gnl|loxAfr1|scaffold_21761 (4447-4981)
               

               
               6-429, gnl|mm7|chr4 (57753505-57753908)
               

               
               6-429, gnl|monDom2|scaffold_19 (33368673-33369256)
               

               
               6-429, gnl|oryCun1|scaffold_198186 (131242-130699)
               

               
               6-429, gnl|panTro1|chr11 (94330738-94331295)
               

               
               6-429, gnl|rheMac2|chr15 (26253547-26252989)

Aligned organism(s): 12 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-429, gnl|bosTau2|chr8 (53710341-53709919)
               

               
               6-429, gnl|canFam2|chr11 (68015397-68015956)
               

               
               6-429, gnl|dasNov1|scaffold_15198 (53985-54500)
               

               
               6-429, gnl|echTel1|scaffold_276292 (265-805)
               

               
               6-429, gnl|hg17|chr9 (109787194-109787752)
               

               
               6-429, gnl|Hg17|chr9 (109787369-109787800)
               

               
               6-429, gnl|loxAfr1|scaffold_21761 (4447-4981)
               

               
               6-429, gnl|mm7|chr4 (57753505-57753908)
               

               
               6-429, gnl|monDom2|scaffold_19 (33368673-33369256)
               

               
               6-429, gnl|oryCun1|scaffold_198186 (131242-130699)
               

               
               6-429, gnl|panTro1|chr11 (94330738-94331295)
               

               
               6-429, gnl|rheMac2|chr15 (26253547-26252989)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	6-429, gnl\|bosTau2\|chr8 (53710341-53709919)
	6-429, gnl\|canFam2\|chr11 (68015397-68015956)
	6-429, gnl\|dasNov1\|scaffold_15198 (53985-54500)
	6-429, gnl\|echTel1\|scaffold_276292 (265-805)
	6-429, gnl\|hg17\|chr9 (109787194-109787752)
	6-429, gnl\|Hg17\|chr9 (109787369-109787800)
	6-429, gnl\|loxAfr1\|scaffold_21761 (4447-4981)
	6-429, gnl\|mm7\|chr4 (57753505-57753908)
	6-429, gnl\|monDom2\|scaffold_19 (33368673-33369256)
	6-429, gnl\|oryCun1\|scaffold_198186 (131242-130699)
	6-429, gnl\|panTro1\|chr11 (94330738-94331295)
	6-429, gnl\|rheMac2\|chr15 (26253547-26252989)